Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5975g00004 ATGATGCAGTTCATGTTGTTTCTTCTCTTTCTTTTTGCTCCAATCAGAGCACTTTCCGACGACCCACCCTTCAACGACGACGTGTTGGGTTTGATTGTCTTTAAAGCGGGTTTGCAAGACCCGAAGGCTAAGCTCTCTACTTGGAACGAAGATGACAATAATCCCTGCAAGTGGGCTGGAGTCAAATGTGATCCTACAACCAATCGGGTCTCCGCAATTGTCCTTGACGGCTTTTCTCTTGCTGGGCACATTGATCGAGGGCTCCTGAGATTACGGTCCCTCCAAATTCTCTCACTTTCCAACAACAACTTCTCTGGGTCCATAAACCCAGATCTTCTTCGCCTTGGGAGTTTGCAAGTGCTGGACTTCAGTGGGAACAACCTCTCTGGCTCTATACCAGAAGGGTTCTTCCAACAATGTGGGTCCTTAAGATCAGTTTCATTTGCCAAAAACAGTCTTACTGGTAAGATTCCTGATTCCTTGAGTTCTTGCTCCTTGTTAGTAACTGTTAACTTCTCTTCCAATCAGCTAAATGGGAATTTACCTTCTGAGATATGGTTTTTGAGACAACTACAGTCACTTGATCTGTCCAATAATTTGCTGGAGGGAGAGATTCCTGAGGGAATTGAGAATTTGTATGATTTGAAGGAGTTAAATCTGCAGAGAAATCGCTTCATTGGGAGGCTTCCTGGTGATATTGGAGGATGCATGCTTTTAAAGTCACTTGATTTCAGTGATAACTTTCTCTCTGGGACAATTCCTAAATCAATACAGGGACTCAACTCCTGCACATCCCTCACTTTACACGGGAATTCATTCACAGGAGCGGTTCCTGATTGGATTGGAGAATTGAAAAATCTGGAGGTGTTGGATCTTTCAGCAAATAGATTTTCTGGTCGGCTTCCAAAATCAGTAGGCAATCTCAGGTCACTGAATAAATTAAATCTATCCAAGAATCATTTTACGGGAAATTTGCCGGAATCAATGGTAAACAGTGTTAAGCTTTTGGCTCTAGACGTCAGCCAAAATCAGTTACAAGGGCGTCTTCCCTCATGGATTTTCAGGATGGGCGCACAAAATGTTTCACTCCCAGGAAACAGCTTCAATAGCAGCAATAATCCTTTATTTACCTCCACACCTGAATCCTACCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGGGTTCTCTGGCGAACTTCCATCTAATATCGGGGGCCTTAGTAGCTTGCAAGTATTAAATATATCCGCCAACAGTATCTCTGGTCCTATTCCAGTGGGTATAGGAGAACTTAAATCATTATACATTCTTGACTTGAGTGACAACAAACTCAATGGAAGTATTCCTCCTGAACTAGAAGGGGCTTTTTCACTCAGTGAACTGCGGTTACGAAACAACTTCCTAAGTGGGGAAATTCCAGCCCAAATTGAAAAGTGCTCTTTGCTAACAACTTTGATTCTTTCTCACAACAAACTTACAAGTTCAATCCCAGCAGCCATTGCCAACCTAAATAATCTTCAGTATGTGGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCCAAAAATCTATCAAATCTTTCCCACCTTTTATTTTTTAATGTCTCCTACAATCACCTTCAAGGGGAGCTACCAGTCGGCGGCTTCTTCAATATCATCTCTCCCTCATCTGTCACTGGTAATCCATCCTTATGTGGTTCTGTTGTCAATCATTCCTGCCCTTCAGTCCATCCCAAGCCTATTGTCCTAAACACGAATTCTTCATACTCCAACTCCAACTCCTCTCAAAACCATGGTCATAGAAAGATTATACTAAGTATTTCTTCTCTTGTTGCCATTGGTGCTGCCGCTTTTATCACTATTGGTGTGGTGGCCATTACTGTCCTAAATGCCCATGTTCGTCGTTCAATGTCTCATTCTGCTACCCCATTTGCTTTCTCGGGTGCTGAGGAGTATAGTGGTTCTCCTGCAAATGATCCTAACTATGGCAAGCTTGTTATGTTTTCTGGTGATGCTGGTTTTGATGATGGGGCAAATAATCTCCTAAACAAAGATAGTATAATAGGTCGTGGTGGATTTGGAATTGTTTATCACACTGTCCTTCTAGATGGGAATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAAAATCTTGCGACAATCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTGTCCAGAGGGAGTCTGCATAAGCTTCTACATGAAGAAGATGAGCATAGCAGCAACATGCTTTCATGGCAACAAAGGTTCAAGATTGTTCTTGGAATGGCAAAAGGGTTGGCCCATTTGCATCAAATGAATATAATTCACTACAATCTAAAATCAACAAATGTTTTGATTGATTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCCTGGTGAGGCTGCTGCCAGTGCTAGACCATTGTCTTTTGAGCAGCAAAATTCAAAGTGCACTTGGTTATATGGCCCCTGAGTTTGCATGTCGGACAGTGAAGTTAACTGAGAAATGTGATGTGTATGGTTTTGGGATCCTGGTTCTTGAGGTGGTGACTGGGAAAAGACCAGTAGAATACATGGAGGATGATGTGGTAGTTCTGTGTGATATGGTAAGGGGAGCATTGGAGGAAGGCAGGGTGGAGCAATGCGTGGACAGGAGGCTTCTGGGTAATTTTGCCGCTGAGGAAGCAATTCCCGTCATAAAATTAGGATTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCCGAGGCAGTTAGTATATTAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2904 0.426 MMQFMLFLLFLFAPIRALSDDPPFNDDVLGLIVFKAGLQDPKAKLSTWNEDDNNPCKWAGVKCDPTTNRVSAIVLDGFSLAGHIDRGLLRLRSLQILSLSNNNFSGSINPDLLRLGSLQVLDFSGNNLSGSIPEGFFQQCGSLRSVSFAKNSLTGKIPDSLSSCSLLVTVNFSSNQLNGNLPSEIWFLRQLQSLDLSNNLLEGEIPEGIENLYDLKELNLQRNRFIGRLPGDIGGCMLLKSLDFSDNFLSGTIPKSIQGLNSCTSLTLHGNSFTGAVPDWIGELKNLEVLDLSANRFSGRLPKSVGNLRSLNKLNLSKNHFTGNLPESMVNSVKLLALDVSQNQLQGRLPSWIFRMGAQNVSLPGNSFNSSNNPLFTSTPESYHGLQVLDLSSNGFSGELPSNIGGLSSLQVLNISANSISGPIPVGIGELKSLYILDLSDNKLNGSIPPELEGAFSLSELRLRNNFLSGEIPAQIEKCSLLTTLILSHNKLTSSIPAAIANLNNLQYVDLSWNELSGSLPKNLSNLSHLLFFNVSYNHLQGELPVGGFFNIISPSSVTGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSSQNHGHRKIILSISSLVAIGAAAFITIGVVAITVLNAHVRRSMSHSATPFAFSGAEEYSGSPANDPNYGKLVMFSGDAGFDDGANNLLNKDSIIGRGGFGIVYHTVLLDGNSVAIKKLTVSGLIKSQEDFEREVKNLATIKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEEDEHSSNMLSWQQRFKIVLGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPVLDHCLLSSKIQSALGYMAPEFACRTVKLTEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEQCVDRRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEAVSILELIQCPSEGQEELE 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5975g00004 967 SMART LRR_sd22_2 188 211 - -
Pral5975g00004 967 SMART LRR_sd22_2 383 409 - -
Pral5975g00004 967 SMART LRR_sd22_2 284 310 - -
Pral5975g00004 967 SMART LRR_sd22_2 239 262 - -
Pral5975g00004 967 SMART LRR_sd22_2 431 454 - -
Pral5975g00004 967 SMART LRR_sd22_2 503 529 - -
Pral5975g00004 967 SUPERFAMILY L domain-like 284 557 - -
Pral5975g00004 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 952 - -
Pral5975g00004 967 Gene3D Ribonuclease Inhibitor 24 175 IPR032675 -
Pral5975g00004 967 SUPERFAMILY L domain-like 43 372 - -
Pral5975g00004 967 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Pral5975g00004 967 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Pral5975g00004 967 Pfam Leucine rich repeat 385 444 IPR001611 GO:0005515
Pral5975g00004 967 SMART LRR_typ_2 115 139 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 284 307 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 212 236 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 431 455 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 308 332 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 188 211 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 383 407 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 527 551 IPR003591 -
Pral5975g00004 967 SMART LRR_typ_2 503 526 IPR003591 -
Pral5975g00004 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 577 - -
Pral5975g00004 967 PRINTS Leucine-rich repeat signature 191 204 - -
Pral5975g00004 967 PRINTS Leucine-rich repeat signature 431 444 - -
Pral5975g00004 967 SUPERFAMILY Protein kinase-like (PK-like) 684 957 IPR011009 -
Pral5975g00004 967 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Pral5975g00004 967 Pfam Leucine Rich Repeat 190 212 IPR001611 GO:0005515
Pral5975g00004 967 Gene3D Phosphorylase Kinase; domain 1 676 758 - -
Pral5975g00004 967 Gene3D Ribonuclease Inhibitor 287 576 IPR032675 -
Pral5975g00004 967 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pral5975g00004 967 SMART serkin_6 682 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5975g00004 967 Pfam Protein kinase domain 684 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5975g00004 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 759 962 - -
Pral5975g00004 967 Gene3D Ribonuclease Inhibitor 176 279 IPR032675 -
Pral5975g00004 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Pral5975g00004 967 Gene3D Transferase(Phosphotransferase) domain 1 759 965 - -
Pral5975g00004 967 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 676 758 - -
Pral5975g00004 967 ProSiteProfiles Protein kinase domain profile. 682 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5975g00004 Pral-Chr5975 13235 16761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5975g00004 1 964 Receptor kinase-like Gene Family AT5G01890 60.825 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pral5975g00004 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5975g00004 - - gmx:100790365 1497.26