Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5974g00006 ATGGGGATTCAGACAATGGGTTCTCAAGGCAATGGGCAACAGTCTCATTTGCAGCCTTCCCCATTGACAAGGCAAAGTTCATGGTATAGTCTTACACTTGATGAGGTTAAAAATCAACTAGGAGACCTGGGGAAGCCATTGGGAAGCATGAACCTTGATGAGCTTCTTCAGAATGTATGGACTGCTGAAGCAAACAAGTGTGTAGGGGTAGAAAATGAGAACTTGTCATCATCATCTTCTCTTCAGCGTCAGGCCAGTCTGACCCTGGCCCGGGCTTTGAGTGGGAAGACAGTTGATGATGTATGGAGAGAAATCCGACAAGGTCAAAAGAAACGATTTTCAGAGGATATAAGAGGTCCAGATAGTGAGATGACTCTAGGTGAAACAACCTTGGAGGATTTCTTGGTACAAGCAGGGCTTTTTGCTGAAGCTTCTATTAGTCCATCTGTGGGGTTGGATGCTATGGAAGCCACAACCCCACAAAGCATTCAACATAAGACAGGCTTGTCATCCTCCCCTTCATTTGGAAGTTTATCTGACACAAGACCAGGCCGCAAAAGGGACACTCCAGATGCATATGAGAAAACGCTGGAGAGGAGGCTAAGGAGAAAAATCAAGAACAGGGAATCTGCTGCCCGTTCACGAGCCAGAAAGCAGGCTTACCATAATGAATTGGTTGGCAAGGTCTCTCGTCTAGAAGAAGAAAATACAAAGCTCAAGAAAGAGAAGGAGTTTGAGGAGAGGTTGACATCTGAATCATCACCTGAACTGACTTATCAGCTTCGAAGAACGAGTTCTGCCTCTTTCTGA 810 0.4556 MGIQTMGSQGNGQQSHLQPSPLTRQSSWYSLTLDEVKNQLGDLGKPLGSMNLDELLQNVWTAEANKCVGVENENLSSSSSLQRQASLTLARALSGKTVDDVWREIRQGQKKRFSEDIRGPDSEMTLGETTLEDFLVQAGLFAEASISPSVGLDAMEATTPQSIQHKTGLSSSPSFGSLSDTRPGRKRDTPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENTKLKKEKEFEERLTSESSPELTYQLRRTSSASF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5974g00006 269 SUPERFAMILY Leucine zipper domain 199 247 IPR046347 GO:0003700|GO:0006355
Pral5974g00006 269 SMART brlzneu 195 263 IPR004827 GO:0003700|GO:0006355
Pral5974g00006 269 Pfam bZIP transcription factor 199 243 IPR004827 GO:0003700|GO:0006355
Pral5974g00006 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 242 IPR004827 GO:0003700|GO:0006355
Pral5974g00006 269 Coils Coil 222 249 - -
Pral5974g00006 269 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Pral5974g00006 269 Gene3D - 197 251 - -
Pral5974g00006 269 MobiDBLite consensus disorder prediction 242 269 - -
Pral5974g00006 269 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 197 250 - -
Pral5974g00006 269 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 267 IPR043452 GO:0003700|GO:0045893
Pral5974g00006 269 MobiDBLite consensus disorder prediction 1 23 - -
Pral5974g00006 269 MobiDBLite consensus disorder prediction 252 269 - -
Pral5974g00006 269 MobiDBLite consensus disorder prediction 163 179 - -
Pral5974g00006 269 MobiDBLite consensus disorder prediction 163 194 - -
Pral5974g00006 269 CDD bZIP_plant_BZIP46 199 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5974g00006 Pral-Chr5974 49459 55120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5974g00006 22 269 bZIP Transcription Factor Family AT3G56850 46.479 5.60e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5974g00006 bZIP_1 9.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5974g00006 K14432 - gmx:100798549 401.749