Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5974g00001 ATGATTTGCTCTCTCAAACAACCTGGTGTTTCTTTCAGTTGTTCTGATGTTGTTCTTCGGAGAAAACAGTCAAATCCCTTTCAGTCAAGCTTTCTTTTACCTTGCATACCGAAGGGAAAAGCTGAGCGATCTCTGGTTTCAGTGCACAAACCCTTGCACCTTTCTTCTCCGAGTAAGAAAATTTCAACGCTGAATCTTCCGTCAGTGAATCCTCGTGGAAATTCCATCAGATGCGAAGCTTTTGAGGCTGACCGATCAAACATTGAAGCAAGCACGCCATCGGAGGCGGCGAAGAGGTTGAAAATTGGAATATATTTCGCAACATGGTGGGCTCTGAACGTGGTCTTCAATATTTATAACAAGAAGGTTCTGAATGCATATCCGTACCCCTGGCTTACTTCAACGCTCTCACTCGCATGTGGGTCTCTTATGATGTTGATTTCTTGGGCCACGAGGATAGTGGAGGCGCCAAAGACTGATTTTGAGTTTTGGAAGACTCTGGTGCCGGTTGCTGTTGCTCATACCATAGGACATGTGGCTGCAACGGTTAGTATGTCAAAGGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGTGAGCCTGCTTTCAGTGTACTGGTCTCCAGATTTCTTCTGGGCGAGTCCTTCCCAGTACCAGTCTATCTGTCCTTAGTGCCAATCATCGGGGGGTGTGCACTTGCTGCTGTGACGGAGCTCAATTTCAACATGACTGGTTTTATGGGGGCCATGATTTCGAATTTGGCATTTGTGTTTCGAAACATCTTTTCAAAACGCGGCATGAAGGGGAAGTCTGTTAGCGGAATGAACTACTATGCTTGTTTGTCTATATTGTCTCTCTTAATTCTGGCACCATTCGCAGTTGCTGTTGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAATTTGTATGGTGGGTGGCGGCTCAGAGTGTGTTCTATCATCTGTATAATCAGGTATCATACATGTCTTTGGATGAGATCTCTCCCTTGACATTTAGCGTTGGGAACACCATGAAACGAATTTCTGTCATAGTCTCCTCAATCATCATCTTCCACACGCCGGTTCAGCCCATCAATGCCCTTGGAGCTGCTATTGCTATCTTTGGAACCTTCTTGTATTCACAGGCAAAGCAATAG 1182 0.4594 MICSLKQPGVSFSCSDVVLRRKQSNPFQSSFLLPCIPKGKAERSLVSVHKPLHLSSPSKKISTLNLPSVNPRGNSIRCEAFEADRSNIEASTPSEAAKRLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIVEAPKTDFEFWKTLVPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILAPFAVAVEGPQMWAAGWQTALSQIGPQFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVQPINALGAAIAIFGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5974g00001 393 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
Pral5974g00001 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pral5974g00001 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Pral5974g00001 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5974g00001 Pral-Chr5974 1425 6302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5974g00001 1 392 Antiporters AT5G54800 75.062 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5974g00001 K15283 - gmx:100801832 618.616