Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5968g00002 ATGGCCGCTGTTCGACTCTCCCTTTTCTTCCTCTTCCTCCTCCTCACTCTTCCTTCTTTCTCTTCTTCTTCCGACACCGACGCCCTCCTCAAGCTCAAGCAATCTTTCACCAATTCTGCTTCTCTGTCTTCCTGGGTCCCTAATTCCTCCCCCTGCCGGTGGGCCGGCATCATGTGCGACAACAACACCATCATCGGTCTCCACCTTTCCGACATGGGTCTTTCCGGCAAGATCGACATTGACGCTATGCTGGAGATTAAAGGCCTTCGAACCGTCAGCTTAGTCAACAATTCCTTCTCGGGTCCTATACCAGAGTTCAACAAAATCGGTGCTCTCAAGGCTTTATACTTATCCACCAACCAATTTTCAGGGGAGATTCCCTCGGATTTCTTCTCCTATTTGAACTCACTGAAGAAAATCTGGCTTTCTGAGAATAAATTCTCGGGGCCCATCCCCAATTCCATATCCCAGCTAGACATGCTCCTAGAGATTCACCTCGAGAACAATGAATTTTCCGGAGCCATCCCACCTCTGTCGCAAAGCATCAAATCGCTGGACATGTCCAACAACAACCTTGAAGGTCCAATCCCAGAGAGCTTAGCGAAATTCGAGGCTAATTCCTTCAAGGGAAACGAGGGGCTATGCGGGAAACCTCTAGACAAGGCGTGCGACCAGCAGGGCGAGAGTAAAAATTCTTCCGGCCACGTCATGTTGATCATCCTCTTCATCGTCTGCTTGATCATCGCAGTCGCGCTGTTCTTAGTGGTTAGGTCAAGGCGCCGTCTAGACGGCGACTTCAGCGTGCTGAGCAGAGATAGCGTGGACGAGGTGGTGCAAGTGCACGTGGGGAGCTCAACCGAAAGCAGAGAATCGGATTCGAGCGGGAGGGGGACGGGTTCCAAGAGGGGCGTGCCCAAGAGCGGGAATGCGGATCTGGTGGTGGTGAATGAGGAGAAGGGCGTGTTTGGGTTGCCGGACTTGATGAAGGCGGCCGCGGAGGTTCTTGGAAACGGATCATTGGGATCGGCATATAAAGCGGCCATGTCGAACGGGTTAAGTGTGGTGGTGAAGAGGGTGAGAGCGATAAATCAGATAGGTAGAGATTTTTTCGACGCCGAGATGAGAGGCTTTGGGAGAATTAAACATGCAAACATCTTGACCATTTTGGCATACCACTTTCGCAAAGAAGAGAAGCTCATCATCTCAGAGTACATGCCCAGAGGCAGCTTGTTATATGTTTTGCATGGTGATCGGGGAACATCTCATGCTGATCTGACCTGGCCCGTGCGTTTGAAGATAATCAAGGGAATTGCACAAGGTCTTCGCTTCCTTCATTCCCACTTCTCTTCCTACGATCTTCCCCACGGCAACTTGAAATCCAGCAATGTCCTCCTCACACAAGATTACGAGCCACTCCTCTCTGATTACGCCTTGCATCCGCTTCTCAACCCCAATTCTTTCAACGCATTATTCGCCTTCAAATCCCCAGACTACGTTCAGCACCAGCTAATTTCCCAGAAAGTCGACGTCTACTGCCTCGGAATCATCATCCTGGAGATCCTCACCGGAAAATTCCCTTCTCAGTATCATAGCAACGGGAAGGGCGGCACCGACGTCGTGCAATGGGTGCTCGCTGCAATTTCTGAGAGAAGAGAAGCAGAAGTGATTGATCCTGAAATGGCAAACACCCCTAACTCCTTAGATCAAATGCTGAAAATTCTCCAAGTCGGAGCCGCTTGCACCGAAAGTAACCCTGAGCAACGAATTAACTTAAATGAAGCCATTAGGAGGATAGAGGAAGTACAAGTCTAA 1812 0.5022 MAAVRLSLFFLFLLLTLPSFSSSSDTDALLKLKQSFTNSASLSSWVPNSSPCRWAGIMCDNNTIIGLHLSDMGLSGKIDIDAMLEIKGLRTVSLVNNSFSGPIPEFNKIGALKALYLSTNQFSGEIPSDFFSYLNSLKKIWLSENKFSGPIPNSISQLDMLLEIHLENNEFSGAIPPLSQSIKSLDMSNNNLEGPIPESLAKFEANSFKGNEGLCGKPLDKACDQQGESKNSSGHVMLIILFIVCLIIAVALFLVVRSRRRLDGDFSVLSRDSVDEVVQVHVGSSTESRESDSSGRGTGSKRGVPKSGNADLVVVNEEKGVFGLPDLMKAAAEVLGNGSLGSAYKAAMSNGLSVVVKRVRAINQIGRDFFDAEMRGFGRIKHANILTILAYHFRKEEKLIISEYMPRGSLLYVLHGDRGTSHADLTWPVRLKIIKGIAQGLRFLHSHFSSYDLPHGNLKSSNVLLTQDYEPLLSDYALHPLLNPNSFNALFAFKSPDYVQHQLISQKVDVYCLGIIILEILTGKFPSQYHSNGKGGTDVVQWVLAAISERREAEVIDPEMANTPNSLDQMLKILQVGAACTESNPEQRINLNEAIRRIEEVQV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5968g00002 603 Pfam Protein kinase domain 333 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5968g00002 603 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Pral5968g00002 603 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
Pral5968g00002 603 MobiDBLite consensus disorder prediction 281 307 - -
Pral5968g00002 603 MobiDBLite consensus disorder prediction 281 300 - -
Pral5968g00002 603 Gene3D Transferase(Phosphotransferase) domain 1 405 603 - -
Pral5968g00002 603 SUPERFAMILY L domain-like 23 203 - -
Pral5968g00002 603 Gene3D Ribonuclease Inhibitor 182 221 IPR032675 -
Pral5968g00002 603 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Pral5968g00002 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 602 IPR046959 -
Pral5968g00002 603 Pfam Leucine Rich Repeat 182 202 IPR001611 GO:0005515
Pral5968g00002 603 FunFam Nuclear pore complex protein NUP107 22 177 - -
Pral5968g00002 603 Gene3D Phosphorylase Kinase; domain 1 305 404 - -
Pral5968g00002 603 ProSiteProfiles Protein kinase domain profile. 329 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5968g00002 603 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5968g00002 Pral-Chr5968 17753 19690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5968g00002 1 603 Receptor kinase-like Gene Family AT3G42880 49.375 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5968g00002 Pkinase 3.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5968g00002 - - gmx:100788667 797.349