Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5967g00006 ATGGCCTTAGCCATATCCCCCACGGCACTGTCAACTTTTCCTAACAGAGAAATACACCAGAAGATCTTCCTGGGAAGAAAAGCAACAAGCCTTCCCAGAAAATTTATCCCCGGTGCCACGAAAGGAGTATCAAGCGTTTGTGAGCCACTTCCTCCGGATAGGCCATTGTGGTTTCCCGGTAGTTCACCTCCCGAGTGGCTCGATGGCAGTCTTCCTGGAGATTTCGGTTTCGACCCTCTTGGATTAGGGTCGGATCCAGAGTTACTAAAATGGTTCGCTCAAGCAGAATTGATGCATGCGAGATGGGCAATGCTGGGGGTATCGGGAATTCTGATCCCAGAAGTATTAGAAAAGATGGGATACATTGAGAACTTCTCCTGGTACGATGCTGGTGCTCGAGAATATTTTGCTGACCCTACGACGTTGCTTGTGGTGCAATTGGGCTTGATGGGCTGGGTGGAGGGCAGGAGATGGGCCGATATGATTAACCCAGGGAGTGTTGACATTGAGCCCAAGGTACCGCACAAGAAGAATCCGAAGCCGGACGTGGGGTACCCGGGGGGATTATGGTTCGACCCGATGATGTGGGGACGAGGATCGCCGGAGCCAGTGATGGTGCTGAGGACCAAGGAGATCAAGAACGGTCGACTGGCCATGCTGGCTTTTGTAGGGTTCTTGTTCCAAGCTATTTATACAGGCGAAGGCCCTATTGAAAACTTGATGGCACATGTTGCGGACCCTGGCCATGCCAACATTTTCTCGGCTTTCACGTCAAATTAG 780 0.5141 MALAISPTALSTFPNREIHQKIFLGRKATSLPRKFIPGATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPEVLEKMGYIENFSWYDAGAREYFADPTTLLVVQLGLMGWVEGRRWADMINPGSVDIEPKVPHKKNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFLFQAIYTGEGPIENLMAHVADPGHANIFSAFTSN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5967g00006 259 SUPERFAMILY Chlorophyll a-b binding protein 53 257 - -
Pral5967g00006 259 Gene3D Chlorophyll a/b binding protein domain 64 249 - -
Pral5967g00006 259 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Pral5967g00006 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 257 IPR001344 GO:0009765|GO:0016020
Pral5967g00006 259 FunFam Chlorophyll a-b binding protein, chloroplastic 64 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5967g00006 Pral-Chr5967 55965 57675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5967g00006 52 257 Chloroplast and Mitochondria Gene Families AT3G61470 69.417 5.96e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5967g00006 K08908 - gmx:100812066 476.092