Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5967g00005 ATGGCCTTAGCCATATCCCCCACGGCACTGTCAACTTTTCCTAACAGGTACAGAGAAATACACCAGAAGATCTTCCTGGGAAGAAAAGCAACAAGCCTTCCCAGAAAATTTATCCCCGGTGCCACGAAAGGAGTATCAAGCGTTTGTGAGCCACTTCCTCCGGATAGGCCATTGTGGTTTCCCGGTAGTTCACCTCCCGAGTGGCTCGATGGCAGTCTTCCTGGAGATTTCGGTTTCGACCCTCTTGGATTAGGGTCGGATCCAGAGTTACTAAAATGGTTCGCTCAAGCAGAATTGATGCATGCGAGATGGGCAATGCTGGGGGTATCGGGAATTCTGATCCCAGAAGTATTAGAAAAGATGGGATACATTGAGAACTTCTCCTGGTACGATGCTGGTGCTCGAGAATATTTTGCTGACCCTACGACGTTGCTTGTGGTGCAATTGGGCTTGATGGGCTGGGTGGAGGGCAGGAGATGGGCCGATATGATTAACCCAGGGAGTGTTGACATTGAGCCCAAGGTACCGCACAAGAAGAATCCGAAGCCGGACGTGGGGTACCCGGGGGGATTATGGTTCGACCCGATGATGTGGGGACGAGGATCGCCGGAGCCAGTGATGGTGCTGAGGACCAAGGAGATCAAGAACGGTCGACTGGCCATGCTGGCTTTTGTAGGGTTCTTGTTCCAAGCTATTTATACAGGCGAAGGCCCTATTGAAAACTTGATGGCACATGTTGCGGACCCTGGCCATGCCAACATTTTCTCGGCTTTCACGTCAAATTAG 786 0.514 MALAISPTALSTFPNRYREIHQKIFLGRKATSLPRKFIPGATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPEVLEKMGYIENFSWYDAGAREYFADPTTLLVVQLGLMGWVEGRRWADMINPGSVDIEPKVPHKKNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFLFQAIYTGEGPIENLMAHVADPGHANIFSAFTSN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5967g00005 261 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Pral5967g00005 261 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Pral5967g00005 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 46 259 IPR001344 GO:0009765|GO:0016020
Pral5967g00005 261 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
Pral5967g00005 261 SUPERFAMILY Chlorophyll a-b binding protein 55 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5967g00005 Pral-Chr5967 55958 57675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5967g00005 54 259 Chloroplast and Mitochondria Gene Families AT3G61470 69.417 6.09e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5967g00005 K08908 - qsa:O6P43_002643 476.478