Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5967g00003 ATGTCGAGCTCCTCGGATTTTCCCGGCCCGAAGCCGGCCACGTCGCCGGAGAAGCCTTCTTTCTCCCAGACTTGCAGTCTGCTGAGTCAGTACCTGAAGGAGAAGGGAAGCTTTGGTGATCTTGCCCTTGGGATGACGCGGGGCACCCAAGCAATCGGGTCAACTGAAGCATCTTGTCAGACTGCGACGACCATGGACTTATTTCCACCTAAGGAAAACACACAGGATTTACCCTCTAATTCCAGTGTTCCTAAGCCAGTGACTAAGGATCCTAAAGCTCCACAACTGACCATCTTTTATGGCGGACAAGTAATTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAGGAGATCATGTCTTTTGCCAGCAAAGGAAACACCCAAAGCCAGAACCCCTCTGTTTACACTTTTGCTCAGAGCGCACCTTCGTTTCCTGCTAATTTGGCCAGAACCTCCGCTGATCCGAGCGCTTCAATCACTCCTCATCCTCAACCACCGTCCAGACCTGTTACTTGTGATCTACCTATTATGCGTAACGCATCGCTTCACCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAGGAAGCAAGCCCACAGTGGGTCCTAGCAAGCCAGTGGAGTCAATGCCGTGGCTGGGCGTAGCTGCTAAATCACCACAAAACTGA 684 0.5088 MSSSSDFPGPKPATSPEKPSFSQTCSLLSQYLKEKGSFGDLALGMTRGTQAIGSTEASCQTATTMDLFPPKENTQDLPSNSSVPKPVTKDPKAPQLTIFYGGQVIVFDDFPAEKAKEIMSFASKGNTQSQNPSVYTFAQSAPSFPANLARTSADPSASITPHPQPPSRPVTCDLPIMRNASLHRFLEKRKDRIAAKAPYQGSKPTVGPSKPVESMPWLGVAAKSPQN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5967g00003 227 Pfam Jas motif 175 200 IPR018467 -
Pral5967g00003 227 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 206 IPR040390 -
Pral5967g00003 227 Pfam tify domain 91 123 IPR010399 -
Pral5967g00003 227 MobiDBLite consensus disorder prediction 1 22 - -
Pral5967g00003 227 MobiDBLite consensus disorder prediction 193 227 - -
Pral5967g00003 227 MobiDBLite consensus disorder prediction 66 92 - -
Pral5967g00003 227 MobiDBLite consensus disorder prediction 151 171 - -
Pral5967g00003 227 ProSiteProfiles Tify domain profile. 89 124 IPR010399 -
Pral5967g00003 227 SMART tify_2 89 124 IPR010399 -
Pral5967g00003 227 MobiDBLite consensus disorder prediction 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5967g00003 Pral-Chr5967 34381 36379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5967g00003 1 223 Tify Gene Family AT1G19180 42.007 2.63e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5967g00003 tify 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5967g00003 K13464 - gmx:100801449 278.485