Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5963g00002 ATGGATACAAATTTAACCCCAAGATTGGGACTTGAATTTGAAACTTTGGAAGAAGCATGGCAATATTGGTCGAGTTATGGTGGCAAAACTGGATTTGGTGTTAGAAAGCAGTATTTCAGCAAGAGTAGGAAGGATGGCACCATTACTTCATATAAATATGTGTGTTGCAAGGAAGGTGTACGAAGACCAGATAAAAGAGATTATAAAACAATCCATCCTCGACCAGAGACAAGAACAGGATGTAAAGCAAGAATGACTGTGTCACGCATAAATGGAAAATATAGAATTGTTGACTTTGTTGACGAGCATAATCATCCGCTTCATTTTCCAGAAACAGTGCATTTGAAAGCATCCCAACGGAAAGAGAATGAGGATGAGAAAGATGTAAAAATCCGGGAATTGGCTGCCGAGTTACAGCGTGAGAGAAAGCGAAGAGCAGTTCTCCAACAACAGCTTGAGATAATTTTGAGAGATGTTGAGCAACATTCTGATAAAGTATCCAAAACCATTAATGATGCTCTTCAGAGAGTGAAAGAGGTTGAAGAGAAAGGGAATAGCACGTCACCCTCCTCAAAGCTTGATGCTGCTAAGTAA 594 0.3973 MDTNLTPRLGLEFETLEEAWQYWSSYGGKTGFGVRKQYFSKSRKDGTITSYKYVCCKEGVRRPDKRDYKTIHPRPETRTGCKARMTVSRINGKYRIVDFVDEHNHPLHFPETVHLKASQRKENEDEKDVKIRELAAELQRERKRRAVLQQQLEIILRDVEQHSDKVSKTINDALQRVKEVEEKGNSTSPSSKLDAAK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5963g00002 197 MobiDBLite consensus disorder prediction 177 197 - -
Pral5963g00002 197 Coils Coil 131 183 - -
Pral5963g00002 197 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
Pral5963g00002 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5963g00002 Pral-Chr5963 4229 8091 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5963g00002 FAR1 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5963g00002 - - pcin:129291239 373.629