Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5962g00004 ATGGATTTGGATACTGAGGTAGGAAGTGTTCAAAGTTCTGCTGAGAAAATACCAACAACATGTGAAGACAGATCCATTTCAGAACCTTATGTTGGTATGGAGTTTGATTCTGAAGAGGCTGCCAGGGAATTTTACAGTGGATACGCAAGACAGGAAGGGTTTATTGTTCGTCTTGATCGTTGCCATCGTTCTGAGACTGATAATAGAATCCTTTCTCGTCGTTTTTCATGCAATAAGCAAGGCTTTTATGTGAGACCTAGAAATGGGACCAAACCAGTTCAGAGGCCACGAGTTAGCATAAGAGAAGGCTGTGAGGCTATGATGTTGGTTAAAGTAAACAATCATGGGAAATGGGTTGTTACTAAATTTGTGAAGGAACATTGTCACCCTCTACAAGTTTCTGCCTATGCTACTGATAGAACTTTGCTGGAATCGAAGGATTTTAAGATTCAACTGCTCACGAGGGAGCTTCAGCGTCATGACAAGTTATGTCAACTATATCGCCAGCTTTTACTTTCCCTACTGGAATCTGTGGAGGAGCAAACTCAAGTTTTATCAGGAAAACTCGAACTTGTCGTTAACAATGTAAAACAGCTTGAGAACGATGTTGAAAAACCTTTGGACACTCACTAG 633 0.4092 MDLDTEVGSVQSSAEKIPTTCEDRSISEPYVGMEFDSEEAAREFYSGYARQEGFIVRLDRCHRSETDNRILSRRFSCNKQGFYVRPRNGTKPVQRPRVSIREGCEAMMLVKVNNHGKWVVTKFVKEHCHPLQVSAYATDRTLLESKDFKIQLLTRELQRHDKLCQLYRQLLLSLLESVEEQTQVLSGKLELVVNNVKQLENDVEKPLDTH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5962g00004 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 202 - -
Pral5962g00004 210 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5962g00004 Pral-Chr5962 37594 41144 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5962g00004 FAR1 9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5962g00004 - - pvu:PHAVU_010G032600g 244.973