Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral595g00002 ATGTGCAGCAGTATCTTTGGCTCAATAATCATGGACAACAATTATCATCAAGGCGATTTAACTGACATTTTCCGAGCAAGTAGTAGCGGGGGTGGCCGTGGCGGCGGCGGAGGTGGCGGCGGCTCATATGGTACTTCTTCAACATCAGAATTAGCTCCCCATGATCTCCCTTCTTCTTCATCGGAAAGTTGGCACCACCACCATCATCACCACCAGATGGATTTCTCTTCTGTAATAATGGAAGATTCTCACAGAGCCACCAACGTCTTCTGCGATCCCTTCTCGAACATGCGAGATCCCTTTCTGCAAGACCTTGATTTCCCCTTACCTTCTTCATACTTCAGTTCTGCTACTAATAATTCTGTCATGGAAGATGCGTCTCCTGGTTTTTCTGCTTCTTCTTCTCTTGTTTTGTCTCATCACCACAAGCTTGTTGAAGACGATATAAGAATAAGGCCTGCTTTAGCAGCCACAGCTTGTAACAATAATACCATATTCTCCAACATGATTCAGATCTCTCCCAGCAGTTTGAACAACGCCGCCGCCAAGTTACCACCACCACCAGTTTCGCCGTGTGATTCTTCTACTCCTCCGGTGAATATGGCCGCCGCCGCCGCCATGAATTCTTCGTCTTCATCGTCGTTGCCATCGCGGAGGGGAATTGAGCCTTCTTCTTCTTTGGTTTCTGCAGCAGTCAACATGAATATCACCGTGGACAACGCGGCGGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTATGTATACCTGCACCAGCAGCTGCAAATAGCAGACCAAGTAGTGGAGAAGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTACCCAAGGGGTTACTACAGATGCAGCAGTTCGAAGGGTTGTTCAGCTAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCTCTTGCCGGCTCAACAAGGTCTCAGCCTTCCAAGAACAACAACAACAACAACAGTGCTTCCAGTAATAAGAACAGCAACAATTCCGATCAAGTTTTGATTCGGCCGCCACCTCGAGACGGTGGCAGCATGAAGCCGAAGGATGAGGAGGAGGACGAGCAGCAGCAGCAGGAAGATCATCATCATCATCAGAGAGGGAAAAGCTCATCATCATCGGTGAAGGAGGAGATGGAGTTGGAGATGATGGGGGAGATAACAGAGATGAACCAGAATGAAGAACAAGAGCTTGAGAATCTGATGATGGAAGATGATACTAATAACAATAATGGATCATCAGAAGGTGGAGTGGGATACAAGCCATGTTTCAATGAAGAACATTGTCATCAGCATCATCATCATCATCAAAGAGAATCCAAAGCTTTAGATCCTTTCAATCTCTTTGACTGGTCATCGTCATCATCTGCATCAGCATCAGCAAATCATATTCACAGCACCACCACCACTTCCTTTGAAGAACCAACAAAGAGAGGATTATAA 1581 0.47 MCSSIFGSIIMDNNYHQGDLTDIFRASSSGGGRGGGGGGGGSYGTSSTSELAPHDLPSSSSESWHHHHHHHQMDFSSVIMEDSHRATNVFCDPFSNMRDPFLQDLDFPLPSSYFSSATNNSVMEDASPGFSASSSLVLSHHHKLVEDDIRIRPALAATACNNNTIFSNMIQISPSSLNNAAAKLPPPPVSPCDSSTPPVNMAAAAAMNSSSSSSLPSRRGIEPSSSLVSAAVNMNITVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNNNSASSNKNSNNSDQVLIRPPPRDGGSMKPKDEEEDEQQQQEDHHHHQRGKSSSSSVKEEMELEMMGEITEMNQNEEQELENLMMEDDTNNNNGSSEGGVGYKPCFNEEHCHQHHHHHQRESKALDPFNLFDWSSSSSASASANHIHSTTTTSFEEPTKRGL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral595g00002 526 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral595g00002 526 MobiDBLite consensus disorder prediction 389 424 - -
Pral595g00002 526 MobiDBLite consensus disorder prediction 41 59 - -
Pral595g00002 526 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 163 448 IPR044810 GO:0003700
Pral595g00002 526 Gene3D WRKY domain 256 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral595g00002 526 MobiDBLite consensus disorder prediction 26 67 - -
Pral595g00002 526 MobiDBLite consensus disorder prediction 499 526 - -
Pral595g00002 526 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral595g00002 526 MobiDBLite consensus disorder prediction 300 424 - -
Pral595g00002 526 Coils Coil 422 450 - -
Pral595g00002 526 MobiDBLite consensus disorder prediction 327 381 - -
Pral595g00002 526 SUPERFAMILY WRKY DNA-binding domain 281 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral595g00002 526 FunFam probable WRKY transcription factor 14 256 337 - -
Pral595g00002 526 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral595g00002 Pral-Chr595 53764 57765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral595g00002 1 409 WRKY Transcription Factor Family AT2G34830 43.088 1.00e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral595g00002 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral595g00002 - - pcin:129305007 569.696