Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5958g00001 ATGAGACTCACTTCCATAGTTGTGGGGTCAACTTCTGGCTTCATTCTGCTATCTCTCATCGTTTTGCTGGCTTATTGTCAATTGGCCAGAGCTGCAACCAATCAAGAAAATTCACAGTGGGGACCAAAATCATTGGCGACGTCAAAAGCGAACACCTCCTCATTGTTACCATCCGATTTATGTCGTTACTTCTCAATAAGCGAGGTAAGAGCAGCCACTAATAATTTTCATGATAGTTTAATTATTGGTGTCGGAGGGTTTGGTAATGTCTATAAAGGCCACATTGAGAACGGTTCAATTCCTGTGGCAATCAAACGGCTCAAACAAGGTTCACAACAAGGGCTTAAAGAGTTTGAAACTGAGATTGAAATGCTTTCTCAACTTCGACACCATCATTTGGTATCTCTCATTGGTTATTGCAACGATGACAATGAGATGATCCTTGTCTATGAGTTCATGGCTCGTGGGACCTTTCGTGAGCATCTTTACGATTCTGAAAACCAACCACTTTCTTGGAATCAAAGGCTGCAGATTTGCCTAGGTGCTGCGCGAGGACTACATTATCTACATACAGGTGCAAAGCAAGCAATCATTCATCGCGACGTCAAGTCAACAAACATCTTAATAGATGAGAATTGGATGGCCAAGATTTCGGATTTTGGACTCTCTAAAATGGGACCTGGGGGTATCTCTAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGTTATATGGATCCAGAATACTACACATTGCAAATCTTGACGGATAAGTCAGACGTGTTTTCATTTGGAGTTGTGTTGTTAGAGGGATTATGTGGGAGGCCTCCTATTCTCCGTGCGGTGGACGGGGAGCGACAAAACCTTGTAGACTGGTTTCAAAGACATGTTCATGAGAATGCCATCTATGAGACGGTGGATCCATTCATCAGAGAAAGTATAATGCCGGAGTGCTTAAAGGCATATACTGAGATTGCATTGAAATGCGTAGCTAAAAATGGGAATGAACGGCCATCGATGGGTGATGTGATGTTATGCCTAGAGTATTTAACGGAGACAGTGAACAAAGCGGAGAAGACAAAGCTTGGTGGGACTCTAAATGAGGACATTATTGTTGAAGAAGGATCACTATTCGATGGGTGA 1152 0.4236 MRLTSIVVGSTSGFILLSLIVLLAYCQLARAATNQENSQWGPKSLATSKANTSSLLPSDLCRYFSISEVRAATNNFHDSLIIGVGGFGNVYKGHIENGSIPVAIKRLKQGSQQGLKEFETEIEMLSQLRHHHLVSLIGYCNDDNEMILVYEFMARGTFREHLYDSENQPLSWNQRLQICLGAARGLHYLHTGAKQAIIHRDVKSTNILIDENWMAKISDFGLSKMGPGGISRSNINISTLVKGSIGYMDPEYYTLQILTDKSDVFSFGVVLLEGLCGRPPILRAVDGERQNLVDWFQRHVHENAIYETVDPFIRESIMPECLKAYTEIALKCVAKNGNERPSMGDVMLCLEYLTETVNKAEKTKLGGTLNEDIIVEEGSLFDG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5958g00001 383 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
Pral5958g00001 383 Gene3D Transferase(Phosphotransferase) domain 1 153 372 - -
Pral5958g00001 383 FunFam Receptor-like protein kinase FERONIA 47 152 - -
Pral5958g00001 383 PANTHER OS07G0166700 PROTEIN 60 354 IPR045272 GO:0004714|GO:0006468
Pral5958g00001 383 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Pral5958g00001 383 CDD STKc_IRAK 82 355 - -
Pral5958g00001 383 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5958g00001 383 SUPERFAMILY Protein kinase-like (PK-like) 53 352 IPR011009 -
Pral5958g00001 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral5958g00001 383 Gene3D Phosphorylase Kinase; domain 1 61 152 - -
Pral5958g00001 383 FunFam Receptor-like protein kinase FERONIA 153 370 - -
Pral5958g00001 383 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5958g00001 Pral-Chr5958 150769 151966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5958g00001 15 374 Receptor kinase-like Gene Family AT3G51550 51.330 6.40e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5958g00001 PK_Tyr_Ser-Thr 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5958g00001 - - pcin:129321450 585.489