Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5957g00003 ATGGATGGTCAGGGTTTCTTCGATGAGGACGAGTTCTTGAGCGACGACATCTTTCACCAAGCAGAAAGCAGTCTCCGTCCTCAAGTCGAATCAGACCATAACTCCTCCTCCTCCTACGCCGCCGACGCCGTCGCAGATGCCGTCAACAACACATCCTTCACCCACAACAATGATGGCTTCCCCGCAAGCACTGGCGCCAACTCATTCTTCAACGATCCCAAGCACCCCGCCGTTTCAGCCTTCACTCTGTCTTTTGATAAATCCACCATCATCCCCATCACAGACGAACCTCCATGTCTCGCCAGAACTTCCTCTCCGCCATCGAAACCACAGCGAGCGATTCGCAGCGCTGAACACCGAAACAAGTCCAGATCCTCCTCTGAAGTCATTCATCACATTATAACCGAGAGGAGAAGAAGACAGGACCTCACTCAAAAGTTCATAGCACTCGCCGCCACCATCCCCGGTTTGAAAAAGGTCACTTAG 486 0.5247 MDGQGFFDEDEFLSDDIFHQAESSLRPQVESDHNSSSSYAADAVADAVNNTSFTHNNDGFPASTGANSFFNDPKHPAVSAFTLSFDKSTIIPITDEPPCLARTSSPPSKPQRAIRSAEHRNKSRSSSEVIHHIITERRRRQDLTQKFIALAATIPGLKKVT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5957g00003 161 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 161 IPR011598 GO:0046983
Pral5957g00003 161 MobiDBLite consensus disorder prediction 95 127 - -
Pral5957g00003 161 PANTHER BHLH TRANSCRIPTION FACTOR 11 160 - -
Pral5957g00003 161 MobiDBLite consensus disorder prediction 113 127 - -
Pral5957g00003 161 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 158 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5957g00003 Pral-Chr5957 32204 32689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5957g00003 79 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 37.778 5.52e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5957g00003 - - gmx:100809422 90.1225