Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5954g00008 ATGAAGACCAAACTTCTTCCTTTTCTGCTTCTCCTTCTTCACGAACCGGTTTCTGTTTATGCTTCAGCAGGCCCCCCTGCTCCTGCACTCCCTCTCCAGGCTAATTCTTCAATTCCTTCTTCAATGGATGCTTCCTCCCCAGGTGTTCAGGTAGAGAACAAAGAACACCAAATGGATTTACACAAGAAGATGGTAATAGCGCTCGCCGTTGTTAGTACAGCACTCGTTGTAGTCATTTTTTGCTTCTTGTGCTTCTGGATTTATAGTAGGAAGCATCTATCCAAATCTAATAGGAAAAGCGTTCCTAACTCAGACGCCGAGAAAGAGCTTGCGCTTGCTCCATTTTTAAGTAAATTCAGTTCTGTCAAAGTGGTTGGGAAAAAAGGGTCTCTTCCAATCATTGATTACAAGCAAATAGAAAAAGCGACCGACAATTTCCGGGAAAGTAACATCCTGGGGCAGGGTGGATTTGGATGTGTTTACCAGGCTCGGTTGGATGATAATCTGGACGTTGCCGTCAAGAAACTACACTGTGAAACTCAAAGTGCCGAGAGAGAATTCGAGAACGAGGTGAATTTGTTGAGCGAAATCCGGCATCCAAATATAATTTCTATACTCGGTTGCAGCGAAAATGATGACAAGAGGTTCATTGTCTATGAATTGATGCAAAACGGATCCCTGGAAGCTCAGTTGCACGGACCTTCTCATGGTGCGGCATTGACCTGGCATATGAGAATGAAAATTGCTCTTGATACAGCAAGAGGATTAGAATACCTCCATGAGCACCGTAAACCTCGAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCGAACTTCAATGCCAAGCTGTCTGATTTTGGGCTGGCCATATTGGATGGGTTCCAAAGCAAGAGTAACATAAAGCTGTCAGGCACATTGGGGTACGTTGCCCCTGAATATCTCCTTGATGGAAAATTGACTGATAAAAGTGATGTGTATGCATTTGGGGTTGTGCTTCTGGAGCTGCTGTTAGGAAGGAAGCCGGTGGAAAAACTGTCACCATCTCATTGCCAATCGATTGTCACATGGGCGATGCCACAGCTCACGGACAGATCAAAGCTTCCAAACATAGTAGATCCTGTAATCAAGGACGCCATGGACCTCAAGCACTTATACCAGGTTGCTGCGGTGGCGGTGCTGTGCGTGCAACCAGAACCAAGTTACAGACCGTTGATCACAGATGTGCTGCACTCTCTGGTGCCTCTCGTTCCGGTGGAGCTTGGAGGAACTCTCAGACTCTCACATGTGCCCACTCCGTTATGGCGTAACCAGATTCCACCCACCTTATTTATTAATGTTGTTGCCCCGTCATTCTTGTTTTTGTCAACCCTTGACTTCACCGAAGAAGCACCGCTTCATCTTCGGAGCAAGGCTGATCGGATTGGGGGTCCAGCAGCATTGATTTGTTCGTCACACATGTAA 1473 0.4582 MKTKLLPFLLLLLHEPVSVYASAGPPAPALPLQANSSIPSSMDASSPGVQVENKEHQMDLHKKMVIALAVVSTALVVVIFCFLCFWIYSRKHLSKSNRKSVPNSDAEKELALAPFLSKFSSVKVVGKKGSLPIIDYKQIEKATDNFRESNILGQGGFGCVYQARLDDNLDVAVKKLHCETQSAEREFENEVNLLSEIRHPNIISILGCSENDDKRFIVYELMQNGSLEAQLHGPSHGAALTWHMRMKIALDTARGLEYLHEHRKPRVIHRDLKSSNILLDANFNAKLSDFGLAILDGFQSKSNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPSHCQSIVTWAMPQLTDRSKLPNIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPVELGGTLRLSHVPTPLWRNQIPPTLFINVVAPSFLFLSTLDFTEEAPLHLRSKADRIGGPAALICSSHM 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5954g00008 490 ProSiteProfiles Protein kinase domain profile. 146 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5954g00008 490 SUPERFAMILY Protein kinase-like (PK-like) 127 416 IPR011009 -
Pral5954g00008 490 Gene3D Transferase(Phosphotransferase) domain 1 222 421 - -
Pral5954g00008 490 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Pral5954g00008 490 Gene3D Phosphorylase Kinase; domain 1 111 221 - -
Pral5954g00008 490 SMART serkin_6 146 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5954g00008 490 FunFam Protein kinase superfamily protein 113 221 - -
Pral5954g00008 490 PANTHER OS01G0750732 PROTEIN 44 419 - -
Pral5954g00008 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Pral5954g00008 490 Pfam Protein kinase domain 147 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5954g00008 490 FunFam probable receptor-like protein kinase At1g80640 222 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5954g00008 Pral-Chr5954 56712 60054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5954g00008 51 420 Receptor kinase-like Gene Family AT3G58690 43.767 3.66e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pral5954g00008 Pkinase 9.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5954g00008 - - gmx:100812044 628.246