Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5954g00001 ATGGAACTAGTTATGGAGAGCGTGAAGGAGAAGTGCAAGAGTGTTTGGGGGCGATGCAAGCGATGCAGAGGGGGAAGCAGACGACGTCGCAGCTCCAACATAGTCTCCATGGTTCGAGAATCCTTGGGAAAGAAACAAAATAAGAAGAAGCAGATGGCTCCGGAGGGATGCTTCTGGGTGTATGTGGGACCCCAGAGAGAGAGATTCTTGGTGAAGATAGAGCTAGCTAATCACCCAGTGTTCAAGGAGCTTCTGGATGACGCAGAGAGCGAGTATGGATTCAGAAACGATGGGCCTATTAGGCTTCCTTGTGATGTTAATCTCTTCTGCGACGCTGTGGCGGAGATGGAGATAGAGATGGAAGAAGATAAGATGAGTTCTGCGTCATGGGCTTGCTCCTTTCATCCTAAGAGTTATCCAAACTCACTGATGCACAGTCCTCTTTCCAATCTTTCTAACCATACTGGTACTGCGGATTACGAGCTGTTAAGCCCCTGCAGATTGTATGTTTAG 513 0.4834 MELVMESVKEKCKSVWGRCKRCRGGSRRRRSSNIVSMVRESLGKKQNKKKQMAPEGCFWVYVGPQRERFLVKIELANHPVFKELLDDAESEYGFRNDGPIRLPCDVNLFCDAVAEMEIEMEEDKMSSASWACSFHPKSYPNSLMHSPLSNLSNHTGTADYELLSPCRLYV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5954g00001 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 111 IPR003676 GO:0009733
Pral5954g00001 170 Pfam Auxin responsive protein 21 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5954g00001 Pral-Chr5954 9999 10805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5954g00001 42 114 Calmodulin-binding Proteins AT4G34750 43.836 6.70e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5954g00001 K14488 - pvy:116105444 117.857