Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00010 ATGGCAAAGTATCACCGGACCAACGTCGGATCTCTGGTTCTCGACCGTCACGATCCTACCAGGAATGCAACAGTCGGCTCTCACTGCCGCATATGGAATGCCTTGTCTGCTTCAACAATACGCCGCATCATTTTTGACGCTGTCAGCTGCGGTGGTGGCTCTCGGCATCACCGCCACCACCGTAATGACTTTGCCTCCACTCCGTCACCGGTTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCAGGAGCAGAAACAGAGTGCCTCCAAGTCTCAGCCGAAACCAAATGCGAAGTCGGAGAAATTATCAGATCTTCTGAATATAGCGGAGTCTGAAATTGACGCCGAAACGAAGAAGAAAGAAGAGGCATTGCAGGAGCTGAAGAGAATTGTGAAGGAGTTACAGGTTGAAGATTTGACAAAGCGGCAAATGGCTGCGGCTCGCGTGAGATTGCTCGCAAAGGAAGACTTGGAAGTTAGAGGAACACTTGCAATGCTTGGAGCGATTCCTCCCCTGGTCGGAATGCTTGATTTGGAGGACGTCAATTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAAGCAGCCATTGTCAAAATTGGTGCTGTTCACAAAATGCTAAAGCTCATTGAATCACCAACCGATCCAGATTCGTCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTCCTCTTTAGAACCCTGGAAAATTCACATAAAAAAACTAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAATCTATCAATCTTCCCAGCCAACATCTCATTCATATTGGAAACAGATCTGGTTCCGTTTCTGATAAACGCAATAGGAGACATGGAAGTAAGTGAAAGAATTCTGTCAATCCTAAGCAATTTGGTATCAACCCCTGAGGGCCGAAAAACTATCAGTGCCGTGCGCGATGCATTCTCCATCCTGGTTGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTTTGATGATTATGGCACACAAAGCCTATGGTGACAGGCAGGCCATGATTGAGGCGGGTATTGCTTCGTCACTGCTTGAGTTGATGCTTCTGGGTACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTGAGGATAGACAAAGGGAAGCAGGTATCTAGGAGTTCTGGCGGAAACTTCAGTTCAACTGTATCTGCTCCCATATGCGGCTCTTCGTCATCTTGTACGGAGCCAGATGGAAGTGGAAAGGAGTGTTTGGAAGAGGAGGAAGGTATGATGAGTGACGAGAAGAAGGCAGTGAAGCAATTAGTCCAGCAGAGCTTGCAAAGCAACATGAGGAAAATTGTGAAAAGGGCCAACTTGCCTCAAGATTTCGTTCCATCCGAGCATTTTAAGGCACTCACTTCGGGATCGACTTCGAAAAGCCTGCCGTTTTGA 1533 0.4723 MAKYHRTNVGSLVLDRHDPTRNATVGSHCRIWNALSASTIRRIIFDAVSCGGGSRHHRHHRNDFASTPSPVSSDSGNSKDKSQEQKQSASKSQPKPNAKSEKLSDLLNIAESEIDAETKKKEEALQELKRIVKELQVEDLTKRQMAAARVRLLAKEDLEVRGTLAMLGAIPPLVGMLDLEDVNSQISSLYALLNLGIGNDANKAAIVKIGAVHKMLKLIESPTDPDSSVSEAVVANFLGLSALDSNKPIIGSSGAIPFLFRTLENSHKKTSPQAKQDALRALYNLSIFPANISFILETDLVPFLINAIGDMEVSERILSILSNLVSTPEGRKTISAVRDAFSILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIASSLLELMLLGTALAQKRASRILECLRIDKGKQVSRSSGGNFSSTVSAPICGSSSSCTEPDGSGKECLEEEEGMMSDEKKAVKQLVQQSLQSNMRKIVKRANLPQDFVPSEHFKALTSGSTSKSLPF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00010 510 Coils Coil 451 471 - -
Pral5952g00010 510 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 510 - -
Pral5952g00010 510 SMART arm_5 243 287 IPR000225 GO:0005515
Pral5952g00010 510 SMART arm_5 157 197 IPR000225 GO:0005515
Pral5952g00010 510 SMART arm_5 288 326 IPR000225 GO:0005515
Pral5952g00010 510 SMART arm_5 199 242 IPR000225 GO:0005515
Pral5952g00010 510 MobiDBLite consensus disorder prediction 51 104 - -
Pral5952g00010 510 Coils Coil 100 138 - -
Pral5952g00010 510 Gene3D - 269 422 IPR011989 -
Pral5952g00010 510 SUPERFAMILY ARM repeat 127 410 IPR016024 -
Pral5952g00010 510 Gene3D - 97 268 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00010 Pral-Chr5952 100036 103432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00010 117 419 U-box Gene Family AT2G23140 31.148 1.29e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00010 - - qsa:O6P43_015754 694.501