Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00008 ATGATAGAATCCGCAAAGACAGCACAAAAATCGTGGGCGAAGACACCACTGTGGAAAAGAGCAGAGTTGCTTCATAGGGCAGCCGCTATACTGAAGGAGCATAAAGCACCCATAGCCGAGTGTCTCGTCAAAGAGATTGCAAAGCCAGCTAAAGACGCCGTCACTGAAGTTGTTAGATCAGGTGATTTGGTGTCTTATTGTGCTGAGGAAGGGGTGAGAATTCTTGGAGAAGGGAAATTTCTCGTTTCTGATAGTTTTCCAGGCAATGAAAGGACCAAATACTGTCTCACTTCCAAGATTCCACTAGGGGTTGTTTTAGCGATTCCACCATTTAACTATCCTGTCAATCTCGCTGTTTCAAAAATTGGTCCTGCACTTATTGCTGGAAACTCCCTTGTGCTTAAACCACCAACTCAGGGTGCCGTTGCTGCTCTTCACATGGTGCATTGCCTTCATTTGGCGGGTTTTCCCAAGGGTGTCATTAGCTGTGTGACAGGAAAGGGTTCTGAGATAGGTGACTTTCTTACAATGCATCCAGGGGTGAACTGCATAAGTTTCACTGGTGGAGACACTGGAATTGCAATCTCAAAGAAGGCAGGAATGATTCCTCTTCAAATGGAGCTGGGGGGAAAAGACGCATGCATTGTTCTTGAAGATGCTGATTTGGATTTGGCAGCTGCTAACATTGTAAAAGGAGGCTTCTCTTACAGTGGCCAAAGATGCACTGCTGTAAAGGTTGTTTTGGTCATGGAATCCGTTGCGAACACTCTGGTTGAGAAAGTCAATGCCAAAGTTGCAAAATTAACTGTTGGGTCTCCTGAGGATAACTGTGATATCACCCCAGTTGTCACAGAGTCCTCTGCTAACTTTATTGAAGGGTTAGTAATGGACGCTAAGCAGAAAGGAGCAACATTCTATCAGGAGTACAGAAGGGAAGGGAATCTCATATGGCCTTTGCTGTTGGATAATGTTCGTCCAGATATGAGGATAGCATGGGAGGAGCCATTTGGTCCAGTTGTGCCAGTTGTCAGAATAAGTTCTGTCGATGAAGGAATCAACCATTGTAATGCTAGCAATTTTGGCCTTCAGGGCTGTGTCTTCACAAGAGACATAAACAAAGCAATATTGATAAGTGATGCAATGGAGACAGGAACAGTTCAAATTAATTCAGCACCAGCTCGGGGACCAGATCATTTTCCTTTTCAGGGTCTGAAGGACAGTGGAATTGGTTCGCAAGGAATCAGTAACAGCATTAACATGATGACTAAGATTAAGAGTACGGTGATCAACTTGCCTACCTCTTCTTATGCCATGGGATAA 1320 0.4447 MIESAKTAQKSWAKTPLWKRAELLHRAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIGPALIAGNSLVLKPPTQGAVAALHMVHCLHLAGFPKGVISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLAAANIVKGGFSYSGQRCTAVKVVLVMESVANTLVEKVNAKVAKLTVGSPEDNCDITPVVTESSANFIEGLVMDAKQKGATFYQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVVRISSVDEGINHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGISNSINMMTKIKSTVINLPTSSYAMG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00008 439 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 206 213 IPR029510 GO:0016491
Pral5952g00008 439 CDD ALDH_F11_NP-GAPDH 1 430 - -
Pral5952g00008 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 211 400 IPR016163 GO:0016620
Pral5952g00008 439 SUPERFAMILY ALDH-like 2 430 IPR016161 GO:0016491
Pral5952g00008 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 208 IPR016162 GO:0016491
Pral5952g00008 439 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 210 400 - -
Pral5952g00008 439 PANTHER ALDEHYDE DEHYDROGENASE 2 438 - -
Pral5952g00008 439 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 1 225 - -
Pral5952g00008 439 Pfam Aldehyde dehydrogenase family 2 426 IPR015590 GO:0016491
Pral5952g00008 439 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 234 245 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00008 Pral-Chr5952 84689 88750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00008 1 439 Aldehyde Dehydrogenase Gene Family AT2G24270 89.294 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00008 K00131 - csin:114275069 817.764