Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00005 ATGGAGGAGAGTGATACTCTGTTTGGGCGGTATGAAATCGGCAGGCCTCTGGGGAAAGGAACGTTCGCTAAAGTCTATCACGGCAAGCAAATATCGACCGGCGAGAGCGTTGCGATCAAAGTGATAAGCAAAGAGAAAGTGAAGAGACAAGGGATGATGGAGCAGATCAAGCGAGAGATCTCCGTCATGCGTTTGGTTCAACACCCCAACGTTGTTGAACTCAAAGAAGTGATGGCCACCAAAACTAAGATCTTCTTCGTCATGGAGTATGTTCGTGGGGGCGAGCTCTTCTACAAGGTCGCCAGAGGCAAACTCAAAGAGGACCAAGCACGAAAGTACTTCCAACAATTAATCAGCGCCGTCGATTTCTGTCACAGCAGAGGTGTCTCTCACAGAGATCTCAAGCCTGAGAATTTGTTACTTGATGACCGCGGGAATCTAAAAGTCTCCGATTTTGGCCTCTCGGCGTTGCCGGAACACATGCGATACGACGGCCTCCTCCACACCCAGTGTGGAACTCCGGCGTATGTTGCCCCTGAAGTTTTGAGAAAGAAAGGATATGACGGATCGAAAGCCGATATTTGGTCCTGCGGGGTGATTCTTTACACATTATTGGCTGGGTTTCTTCCGTTTCGACATGAAAACGTCATGACTATGTACACTAAGATCTTCAAAGCCGAGTTCCAATTTCCTCCGTGGTTTTCTGCGGAATCAAGGCGATTGATTTCCAAGATTCTCGTGCCAGACCCAGAAAGTCGAATCACGATTCCTGCGATAATGCGGGTCCCGTGGTTTGAAAAGGGGTTTTCGATCTCATCAGCGTTTCATTCAGAAGAACCCACTTCGAATAAAGCCGTTGAAGAAGACTCCAGAAGCAAGCTTTCATCCCCCAAGTTTTTCAATGCGTTCGAGTTTATTTCTTCGATGTCTTCTGGGTTTGATTTGTCTGGGTTGTTCGAGAACAAGAGGAAGACCGGGTCAATGTTCACTTCCAAGTTTTCAGCCACGACGATCATGTTGAAGATCGAGACGATGGCGAAGAGGTTAGGCTTCAAGGCAGAAAGGGTGAAGGAATTCAAAATCAAGATGGAAGGGAAGTCGGAGGGGAGGAAAGGGAGGTTGTACGTGACGGCGGAGGTGTCCGAGGTGGCGCCGGAAGTCGCCGTCGTCGAGTTTTCAAAGTGTTCCGGCGACACTTTGGAATACGCCAAGTTTTGCGAAAAGGACGTGAGGCCGGCGCTGAAAGACATTGTTTGGACGTGGCAAGGGGACATCACGGGCAATGGCAACATCGAAGATGGTGCCGAGGGACCAACGATGGGACAATGA 1329 0.4936 MEESDTLFGRYEIGRPLGKGTFAKVYHGKQISTGESVAIKVISKEKVKRQGMMEQIKREISVMRLVQHPNVVELKEVMATKTKIFFVMEYVRGGELFYKVARGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDDRGNLKVSDFGLSALPEHMRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYTLLAGFLPFRHENVMTMYTKIFKAEFQFPPWFSAESRRLISKILVPDPESRITIPAIMRVPWFEKGFSISSAFHSEEPTSNKAVEEDSRSKLSSPKFFNAFEFISSMSSGFDLSGLFENKRKTGSMFTSKFSATTIMLKIETMAKRLGFKAERVKEFKIKMEGKSEGRKGRLYVTAEVSEVAPEVAVVEFSKCSGDTLEYAKFCEKDVRPALKDIVWTWQGDITGNGNIEDGAEGPTMGQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00005 442 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Pral5952g00005 442 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Pral5952g00005 442 Pfam NAF domain 297 354 IPR004041 GO:0007165
Pral5952g00005 442 FunFam Non-specific serine/threonine protein kinase 295 419 - -
Pral5952g00005 442 Gene3D Kinase associated domain 1, KA1 295 420 - -
Pral5952g00005 442 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Pral5952g00005 442 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5952g00005 442 SUPERFAMILY Protein kinase-like (PK-like) 7 306 IPR011009 -
Pral5952g00005 442 CDD STKc_SnRK3 10 264 - -
Pral5952g00005 442 FunFam Non-specific serine/threonine protein kinase 4 298 - -
Pral5952g00005 442 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 415 - -
Pral5952g00005 442 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Pral5952g00005 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pral5952g00005 442 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5952g00005 442 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5952g00005 442 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pral5952g00005 442 CDD CIPK_C 301 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00005 Pral-Chr5952 54056 55555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00005 2 433 CBL-interacting serine-threonine protein kinases AT5G10930 68.623 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5952g00005 Pkinase 4.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00005 - - qsa:O6P43_015759 676.781