Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00004 ATGGAAGCAACGTGCGAGAACACTCTTCTCAACCTCAACGCCAGCCCTTCTCGGCACGAGGACGGTGTCCAGGCTGAGGTTTTGATGATGGAAGAGCTGAATCGTTTGAGTAGTGAGAAGAAGATGCTAACTGAGAAGCTTACTCGCGTTACTGAGAGCTACAATGCTCTGCAAAAGCATTTTAACCAAGTCCTTAAGAACACCGATTCTGAGTTGGACTTAAGTACAGTACAATCAAGGAAGAGAAAGGCTATTGGAACCGGGAATTGTATCGGCAATAATATGTTGAATTTTAGCGGCGCTTCTGAGTGCAGCACCAGTACTGAGAATTCATTCAAGAGGCCCAAGGACCACAGTCTCAGTCACCCTATCTCTCCCAAGGTTTCAAAGTACTTCGTGCGCACGCACGCATCAGATCCCAGCTTATATGTGAGAGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTGACTAGAGATAACCCTTCTCCTAGGGCTTACTTTAGGTGCTCCTTTGCTCCTAACTGCCCAGTGAAAAAGAAGGTGCAAAGAAGCGCGGAAGACCCAACTTTATTGGTTGCGACTTACGAAGGAGAGCACAACCATATTATGCATGGAGCTCAAAGTGAAGTGATTGACCCAATTCCAGTGAACTCAAATGCAGGGCCGAGTGAGATTATTGATCAGAATTCCAGCCGCCAGTTTTTGGTTCAACAAATGGTTTCTTCTTTGTCAAAAGATCCCATTTTCAAATCAGCTCTCGCTACTGCCATTTCAGGAAGAATTTTAGAGCACACTGTTCCCTAG 807 0.456 MEATCENTLLNLNASPSRHEDGVQAEVLMMEELNRLSSEKKMLTEKLTRVTESYNALQKHFNQVLKNTDSELDLSTVQSRKRKAIGTGNCIGNNMLNFSGASECSTSTENSFKRPKDHSLSHPISPKVSKYFVRTHASDPSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPNCPVKKKVQRSAEDPTLLVATYEGEHNHIMHGAQSEVIDPIPVNSNAGPSEIIDQNSSRQFLVQQMVSSLSKDPIFKSALATAISGRILEHTVP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00004 268 Gene3D WRKY domain 129 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5952g00004 268 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00004 268 Coils Coil 33 53 - -
Pral5952g00004 268 ProSiteProfiles WRKY domain profile. 146 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00004 268 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 204 IPR044810 GO:0003700
Pral5952g00004 268 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00004 268 SUPERFAMILY WRKY DNA-binding domain 142 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5952g00004 268 FunFam WRKY transcription factor 40 129 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00004 Pral-Chr5952 40604 42397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00004 28 266 WRKY Transcription Factor Family AT2G25000 42.969 4.41e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5952g00004 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00004 - - gmx:100127373 249.21