Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00003 ATGGATGTAAAGGAAGAAACGCTTCAATCGGAGTTGAAACGTGTGAGAGATGAGAACAGCGCCCTAAAAGTGATGCTTCAAGTTCTGAACAGCAAATACCAAAAGGTGCAATATCAACTTCAAGAAATTAAAGGATCGGAACCGAATCAAATTATTGCATCAGTTTCTGATTACGATACGAATAATAAGAGACCAAGAATTGAGTTACCCATAGCTCATAAGCCACTACAGATCTTCGCCAGAACTCATCCAAAGGATAACAGTATGATAGTAAGAGATGGATATCAGTGGCGGAAGTATGGCCAGAAGGTTACAAAAGATAATCCATCGCCTCGAGCCTACTTCAGATGTTCCATGTCTCCAAACTGCCCTGTCAAAAAGAAGGTACAAAGATGCGTCCAAGACAGGTCAATCCTAGTGGCAACTTATGAAGGAGAACACAACCATGGGGTTGTTGATCCTAAAACTCCCCAGGGCTCAGTTGCTGACGACAAATTAGAAGCGACCAACGTTAATGATGCTGGGCTTCCTGGTTGGACTCTGACAGATAAAAGACCCCCCGAGGATGTTGGCACCATCAGAATCGAACAATTTGTGGGTTCTCTCATCAAAGATCCCAACTTCACCGTATCGTTAGCCGAAGCAGTTGCACGCTCCATCACTACCCCACAACGCAAGCAACAAGAAGATCTCGACCTTAATTTGAGTCTCGCTGAAGTGTAA 723 0.4398 MDVKEETLQSELKRVRDENSALKVMLQVLNSKYQKVQYQLQEIKGSEPNQIIASVSDYDTNNKRPRIELPIAHKPLQIFARTHPKDNSMIVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVQDRSILVATYEGEHNHGVVDPKTPQGSVADDKLEATNVNDAGLPGWTLTDKRPPEDVGTIRIEQFVGSLIKDPNFTVSLAEAVARSITTPQRKQQEDLDLNLSLAEV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00003 240 Gene3D WRKY domain 79 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5952g00003 240 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 46 IPR044810 GO:0003700
Pral5952g00003 240 SMART WRKY_cls 91 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00003 240 ProSiteProfiles WRKY domain profile. 86 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00003 240 Coils Coil 5 32 - -
Pral5952g00003 240 Pfam WRKY DNA -binding domain 93 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5952g00003 240 SUPERFAMILY WRKY DNA-binding domain 87 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00003 Pral-Chr5952 29405 31241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00003 8 216 WRKY Transcription Factor Family AT1G80840 36.434 8.23e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5952g00003 WRKY 9.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00003 - - gmx:100170679 274.633