Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5952g00002 ATGGCTGCTGATCGGACTCCCAAAGTTCTTTTTTCAACCCCAAAGAGGAGCAAAGTTGTCCGGCATTACAAGCAGGCCGACTGTGAACTAGCAAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTGGAGTGTATTAGTCTGGATAGTGATTTGGAACGTGAGCAAATGATGTTTCGTATCATGTTTAATACAGCATTTATCCGATCAAATATTTTGATGCTTAACCGTGATGAAATCGACACGTTGTGGAATGATAAGGACCAATTTCCAAAGGATTTTAGAGTAGAGATTCTTTTCTCAGATATGGATGCTTCTTCTTCTGTTATTTCAATTGATATGCCTCGGATTGAGGACAAAGAGGGCCTTCCTATTGAAGCATTTGCCAAGGTTCAAGAAATTTTCAGCAATGTTGACTGGTTAGACTCAAAAACTGAGGTAGTGAATGTGCTCCAGCAGATCACAGCATCAAATAAGCTCCAGGAAATATTCGAAAGTGGGGTTTCTGTAAGACCGAGCAACTTGCCAAAGGATTCATTGTCTGGAAGATTTAATTTTGATCCAACAACACTGGCAGAAAATGATATCTCAAATATGACTTCCACATCTTCTGGAAAAGTCCCTACGTCATATGAATCATCTCCGGATCCTCCTTGCAAAAAGAAAATGGAACCATTGGAAACAAAGGTGTTGTCAGAAAATAACAAGATTACGACATCATCAGGTCATGCGAAGCAATTTGTTTCCCCATCAGACCTCTCAACTGATTCAAATCTTGCTAAAAAGATTATCTCATTGGAATCAAAAGCGTCGCCGGAAAATGATACTGAGAATCTTACATTAAAGGATCAAGGGAATCAATTTCTTCCCTTAGAACTGCCTATGGATGCACTAGAATCAAAGACATTGCTGGAAAATGATGCAAAATTCATTCCAGCAATGGTTCAAGAGAAGAAATCTATTCTTTTAACTGAACCATCCATGGAAGCGAAATCAATGGGAAAAAAGTTCCAACCATTAGAATCAAAACCATTGCCAGACAAAAATACAAAGAGTCTCACATCCTCAGCTCAGGCCAAAGAATCTAGTCTCTCACACAAGCCTTCTGATGATGCTAATTCTCTTAAGAAGATGATAGAAACATCAGAAACAATGGCATTGTCAGAAGACAATACCAAGAGTCTCACATCCGCAGCTCAGACCAAAGAATCTATTCCCTCACATGAACCTTCTGCCGATCCTTATTCTCTCAAAAGGAGGATTGAACCTCAACATTTGCAGGTTGCTCTTCAGTTGCCCACCCAATCCAAAATCATTTCTCCACGGGTGCGTCAAGCTTCTCAATCTGTTCCAGTTTTATATTGTAGTTCTTCACAAGGTTCACCTCTACCCATATCAAGATATCCTAGTGCCCCATCAGCCCTTGGAATAACAGCTTTGTTGCAGGATCGTACGGAAGGGGATATCAAGAAAGAGGTCAATCATGGAGTTACTGTGCCCTCCTCTTCTTCTACGTTGTCTCCTTCTGTCTTAGGGGTGCCAAAATCTGTAAGTCCTACAAGTGTTCCTCCAGTATCATCATCAACATTGCTGCGATCTTTAGCACTGAAATCTTTGATGGATGTTACTGCTGTCACACATAACACTGTTGCACCCCTTGGTCCTGCTGTTTCTTCTCCTTCTCCTCCTCAACCGCAGCCTACGTCAGGAATGATGCAACCTATTGTCACCCAGAACCCAGAAAATATAGCACCTGATAAAACTAAAAAATCACTGGTTCCTCCTACTCCTGCACTCCAATCTCAATCTCAGCATACTTCAGAATTGACGCAACGTGCTGTCACCCAGCACCCTGAGAATATAGCGCATGAAAAAGGTGAAAAGTCATTAGTTTCTCCTCTTCAAACTCCTTATCAACCTCAGCTTTCTTCAGGATTGATGCAACCTATTGTCTTTCAGCAGCCTGAAAATATAACACATGATAAAAGTAAGAAGTCATTAATTTCTCCTCCTGCACCTTTGCCATCTCTTCCTGAGGTTATCAAGAGTTCTATTTCGACCCCTTCTCACCCCACTGCAGCCCCCCTTTCTCCATCTTCTCTGAAGAGCTCATTTTCAACCACTCTTTCACCACCTCCTGCCTCTCAACCATCCTCTTCTTTTCCTGAAACATGTCCACATTCCACTGTTAAAAATTCTTTCAAAGGCCCCCCACCCCCTCCCCCAGCTCCTCACTCAGCTGCAGCTCCTCTTCCATCTCCTTCATGCACAAAGAGTTCATTGTCAACCCGTCCTCCGCCCCCTCCACTCCCTCCACCACCGTCTCCCTCTCCTCTAACATCACAGTCCACTGTAAATGGTTCATCTGCATCTCCCCTTCTCCATCCCTCGCTTCCTCACACAACACCAGTTCCTCTCGCTCCATCTTCCATGAATAGCTCATTTTCACCCGCTCCTTCCCCAGCTCCAGCCCCAAGATCTCCGCATTCCACTTCAGAAAATTCACTCAAAGCTCCCCCTCCCCCACCACCACCTCCATCTCTATCTTCAACTGCTAAGGCCTTTTCAATACCTCCCCCTCCACTCTCTGGAATTCCTTCTTCAGCTGCCAATCTTAATCCTTCTCCACTGAATATGAACAATTCTGCTGCTATCTCTGGCCCTCCACCCCCACCTCCGCCTCCTGGGCATTCTGGAACCATATCTGGTCCTACTCTTACATCAACAGTGCCGCCGCCACCCCTACCTCCTGCTTCTCCTACCACATCTTTGTCAAAGAACTCTGCTACTGTACCTCCTCCCCCTTCAGCGAATGGATTGTCAAAGGCTGGAACTCTGCACCCTGGCACTGGTAACGGAAATATACCTCCAGCTCCTGGACCACCTAGTGTTCCTGGACCGCCTACCGTTCCATTTGGTGCAAAGGGACGTGGCTTGTCACGACCAAATGCAAAAATTCAAACGCAAACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCATGGAAGTTTATGGGCTGAGACGCAGAAACCTGAGGAAGCTTCTAAGGCTCCAGAATTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCAGCTACTCCAAATTCTGATCGTGGAAGCAAAGGAGGAAAATCAAATCGTCTTGCCTCAGGGACTAAAACTGAGAAAGTTCAACTGATTGAGCTAAGGCGAGCATATAATTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCCGATTTAGTGAGCTCTGTCCTTGCTTTGGATGATTCAGCATTAGATGCCGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACGAAGGAAGAGATGGAACTGCTCAGGAACTACACTGGAGATAAGGGCAACTTAGGAAGGTGTGAACAGTTCTTCTTGGAATTGATGAAAGTTCCAAGAGTAGAAAGGAAGTTAAGAGTGTTCTCTTTTAAGATACAATTCGGCACTCAGGTTTCTGAGCTTAGAAGGGACTTGAATATTGTAAACTCTGCATCTGAAGAGATCAGGAGTTCAGTCAAGTTGAAAAGAATTATGCAGACTATTCTTTCTCTTGGTAATGCTTTGAACCACGGAACTGCAAGAGGTGCTGCTATTGGGTTTCGATTGGATAGTCTCCTTAAGCTCACTGATACACGAGCCAGGAATAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTCTCGAAAGACTTAGAGAGCTTGGAAGCTTCAACCAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGCAAAGGACTTGAGAAAGTAGTCCAGGAATTGACTGTGTCAGAGAATGATGGGCCTGTGTCAGAAAATTTCTGCAAGATTTTGAAGGAATTTCTTAGTGATGCTGAAGCGGAAGTGAGGTCTTTGGCTCAACTTTATTCAAATGTGGGTAGAAACGCGGATGCATTAGCTCAATACTTTGGAGAGGATCCTGCACGTTGCCCATTTGAACAAGTTGTATCCACCCTGCTCAACTTTGTGAGGATGTTTGAACGAGCCCATGAAGATAACTGCAAGCAGCTCGAATTCGAGAGAAAGAAAGCAATGAAGGAAGCAGAAAATGAGAAGTTGAAGTTAACTCCTAAAAAGGAATCAGAACAAACGATGCGAACCCCCATTGAGAGTGGCAATATTAAGTGA 4236 0.4363 MAADRTPKVLFSTPKRSKVVRHYKQADCELAKIDIHCHVQGDVVLECISLDSDLEREQMMFRIMFNTAFIRSNILMLNRDEIDTLWNDKDQFPKDFRVEILFSDMDASSSVISIDMPRIEDKEGLPIEAFAKVQEIFSNVDWLDSKTEVVNVLQQITASNKLQEIFESGVSVRPSNLPKDSLSGRFNFDPTTLAENDISNMTSTSSGKVPTSYESSPDPPCKKKMEPLETKVLSENNKITTSSGHAKQFVSPSDLSTDSNLAKKIISLESKASPENDTENLTLKDQGNQFLPLELPMDALESKTLLENDAKFIPAMVQEKKSILLTEPSMEAKSMGKKFQPLESKPLPDKNTKSLTSSAQAKESSLSHKPSDDANSLKKMIETSETMALSEDNTKSLTSAAQTKESIPSHEPSADPYSLKRRIEPQHLQVALQLPTQSKIISPRVRQASQSVPVLYCSSSQGSPLPISRYPSAPSALGITALLQDRTEGDIKKEVNHGVTVPSSSSTLSPSVLGVPKSVSPTSVPPVSSSTLLRSLALKSLMDVTAVTHNTVAPLGPAVSSPSPPQPQPTSGMMQPIVTQNPENIAPDKTKKSLVPPTPALQSQSQHTSELTQRAVTQHPENIAHEKGEKSLVSPLQTPYQPQLSSGLMQPIVFQQPENITHDKSKKSLISPPAPLPSLPEVIKSSISTPSHPTAAPLSPSSLKSSFSTTLSPPPASQPSSSFPETCPHSTVKNSFKGPPPPPPAPHSAAAPLPSPSCTKSSLSTRPPPPPLPPPPSPSPLTSQSTVNGSSASPLLHPSLPHTTPVPLAPSSMNSSFSPAPSPAPAPRSPHSTSENSLKAPPPPPPPPSLSSTAKAFSIPPPPLSGIPSSAANLNPSPLNMNNSAAISGPPPPPPPPGHSGTISGPTLTSTVPPPPLPPASPTTSLSKNSATVPPPPSANGLSKAGTLHPGTGNGNIPPAPGPPSVPGPPTVPFGAKGRGLSRPNAKIQTQTKRSNLKPYHWLKLTRVMHGSLWAETQKPEEASKAPEFDMSELESLFSAATPNSDRGSKGGKSNRLASGTKTEKVQLIELRRAYNCEIMLTKVKIPLPDLVSSVLALDDSALDADQVENLIKFCPTKEEMELLRNYTGDKGNLGRCEQFFLELMKVPRVERKLRVFSFKIQFGTQVSELRRDLNIVNSASEEIRSSVKLKRIMQTILSLGNALNHGTARGAAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLESLEASTKIQLKYLAEEMQAISKGLEKVVQELTVSENDGPVSENFCKILKEFLSDAEAEVRSLAQLYSNVGRNADALAQYFGEDPARCPFEQVVSTLLNFVRMFERAHEDNCKQLEFERKKAMKEAENEKLKLTPKKESEQTMRTPIESGNIK 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 956 971 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 498 528 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 1383 1401 - -
Pral5952g00002 1411 SMART it6_source 666 1409 IPR015425 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 596 617 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 1383 1411 - -
Pral5952g00002 1411 ProSiteProfiles C2 tensin-type domain profile. 1 105 IPR014020 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 663 993 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 837 851 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 782 798 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 347 365 - -
Pral5952g00002 1411 ProSiteProfiles Formin homology-2 (FH2) domain profile. 987 1388 IPR015425 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 887 901 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 334 417 - -
Pral5952g00002 1411 Pfam C2 domain of PTEN tumour-suppressor protein 9 103 IPR014020 -
Pral5952g00002 1411 Gene3D - 1 108 - -
Pral5952g00002 1411 Coils Coil 1363 1390 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 380 409 - -
Pral5952g00002 1411 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 17 105 IPR035892 -
Pral5952g00002 1411 SMART PTEN_C2_2 5 104 IPR014020 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 1040 1059 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 682 733 - -
Pral5952g00002 1411 Pfam Formin Homology 2 Domain 990 1363 IPR015425 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 553 617 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 868 886 - -
Pral5952g00002 1411 PANTHER FORMIN-J 2 1398 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 193 224 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 572 587 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 735 751 - -
Pral5952g00002 1411 Gene3D Formin, FH2 domain 1006 1403 IPR042201 -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 193 213 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 763 781 - -
Pral5952g00002 1411 MobiDBLite consensus disorder prediction 923 937 - -
Pral5952g00002 1411 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1000 1380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5952g00002 Pral-Chr5952 17826 29193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5952g00002 376 494 FH2 protein (formin) Gene Family AT2G25050 38.525 7.00e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5952g00002 - - pcin:129302115 1213.75