Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5944g00002 ATGTCGAAGGCATTTTTGCCAGATATGGAGACAATACAGACACTTCTGCATGCCCCAAAGAATCTTAGCAAACCCAACAAAAAATGGCGCTCCGCATTCGTTAGTATATATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCTCCCGTACCACCATCAAGAACAAGCCTAACCTGTCACCTTCTTCCTCCTATACTGTTATCGATTTAGACACAGATTATTCCTTCTTCAGTGTTAGCCAAACCACACTCACCAATCTCGTGAAGGAGAAAAATGAAGAGACCCTGCAAAATCTTGGTGGGGTGCATGGCGTGGTCTCCGCTCTAAAAACCGACATTGAAAATGGAGTCAAAGGCGGTGGTGATGATGATGATCCCAGTGACGTCATGCGACGGCGCGACGCATTTGGATCTAACACCTATCCCAAACCACCTACGAGAGGTTTCTTTCATTTTGTTAGTGAGGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGCGCTGCTCTGTCTCTTGGCTTCGGCATCAAAGAGAATGGAATCAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCTGTTTTTCTAGTCATTGCTGTATCTTCCATCAGTAACTTCAGACAGAGCAGACAATTCGACAAGCTGTCCCAGGTTAGCAATAACATCCAAGTAGATGTTGTACGAAGTGGTCGCCGATGGCTTGCTCCTGGAAGGCCATTCTCTGCAAGTTGA 750 0.4613 MSKAFLPDMETIQTLLHAPKNLSKPNKKWRSAFVSIYCYRALLSHFKSTLLPSRTTIKNKPNLSPSSSYTVIDLDTDYSFFSVSQTTLTNLVKEKNEETLQNLGGVHGVVSALKTDIENGVKGGGDDDDPSDVMRRRDAFGSNTYPKPPTRGFFHFVSEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRWLAPGRPFSAS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5944g00002 249 PANTHER CATION TRANSPORTING ATPASE 62 239 - -
Pral5944g00002 249 Gene3D - 159 214 - -
Pral5944g00002 249 SMART Cation_ATPase_N_a_2 102 181 IPR004014 -
Pral5944g00002 249 Gene3D - 131 238 - -
Pral5944g00002 249 MobiDBLite consensus disorder prediction 120 136 - -
Pral5944g00002 249 Pfam Cation transporter/ATPase, N-terminus 104 176 IPR004014 -
Pral5944g00002 249 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 227 IPR023298 -
Pral5944g00002 249 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5944g00002 Pral-Chr5944 14445 15268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5944g00002 12 238 Primary Pumps ATPases AT3G22910 56.957 1.54e-67 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5944g00002 K01537 - qsa:O6P43_021514 303.523