Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral593g00001 ATGGTAGTCTTTCACCAACCAAAAATTGACGTCTTTGCTTTTGGAGTTGTCCTATATGAACTTATATCTGCTAAAGAAGCTTTGTCCAGGGCTGGTGAAGCTGGTTCCGAAACAAAATCCCTTGTCTCTTTGTTTGAAGAAGTTTTTGAGAAGCCTAATCCAAAAGAACATCTTCAAAAGCTTGTTGATTCTAGGCTCGGTGATCAATACACAATCGATTCGGTTTACAAGATTGCACAGCTAGCCAAAGTGTGCACAGATGAAGACCCAGACCGACGTCCAAGCATGAGATCTGTTGTGGTGACTCTAATGACACTTTCTTCTTCTTGTGTGGAATGA 339 0.413 MVVFHQPKIDVFAFGVVLYELISAKEALSRAGEAGSETKSLVSLFEEVFEKPNPKEHLQKLVDSRLGDQYTIDSVYKIAQLAKVCTDEDPDRRPSMRSVVVTLMTLSSSCVE 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral593g00001 112 Gene3D Transferase(Phosphotransferase) domain 1 4 111 - -
Pral593g00001 112 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 109 IPR044812 GO:0019199|GO:0045087
Pral593g00001 112 Pfam Protein tyrosine and serine/threonine kinase 8 102 IPR001245 GO:0004672|GO:0006468
Pral593g00001 112 SUPERFAMILY Protein kinase-like (PK-like) 6 100 IPR011009 -
Pral593g00001 112 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral593g00001 Pral-Chr593 973 2614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral593g00001 8 109 Receptor kinase-like Gene Family AT3G21630 56.863 1.76e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral593g00001 PK_Tyr_Ser-Thr 2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral593g00001 - K13429 egr:104435189 139.043