Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5939g00002 ATGCCTGCCGCCGCCGCCGACGCTACGACCACCCCATCAGGTTCCGGCCAAACCATCTGCGTCACGGGCGCCGGTGGCTTCATCGCCTCTTGGATCGTCAAGCTTCTCCTCGAGAGAGGATACACTGTTAGAGGCACCGTCAGAAATCCAGATGATTCTAAGAACGCACACTTGAAGGAGTTGGAAGGAGCGCTGGAGAGGCTAACTCTTCATAAGGTTGATCTTCTTGATCTTGAGTCTGTGAAAGCTGTTGTTAATGGCTGTGATGGCGTCATTCACACGGCCTCTCCCGTCACAGACAACCCCGAAGAGATGGTGGAGCCGGCAGTGAATGGAACAAAGAATGTGATCATAGCAGCTGCAGAAGCAAAAGTGCGAAGAGTGGTGTTCACGTCATCCATTGGAGCAGTTTACATGGACCCCAGCAGGAGCATTGATGCGGTGGTTGATGAGTCTTGCTGGAGCAATTTGGAATATTGCAAGAACACAAAGAACTGGTACTGCTATGGGAAGGCAGTGGCAGAGCAAGCGGCATGGGATGAGGCAAAAGCAAGAGGGGTGGATTTGGTTGTAGTGAACCCAGTGTTGGTGCTGGGACCATTGCTTCAATCCGCTATAAATGCTAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCCAAGACCTATGCAAATGCTACTCAGGCTTATGTTCATGTCAAGGATGTGGCATTAGCCCATATTCTGGTTTATGAGACTCCTTCTGCCTCTGGTCGTTATTTATGTTCTGAGAGTTCCCTCCACCGTGGAGAGCTGGTTGAGATCCTGGCCAAATACTTCCCAGAATACCCAATTCCTACCAAATGTTCAGATGAGAAGAATCCAAGAGCAAAACCCTACACATTTTCTAACAAGAAGCTGAAGGATTTAGGACTAGAGTTTACGCCAGTGGATCAATGTTTATACGACACCGTCAAGAGCCTGCAGGACAAAGGCCATCTTCCTCTTCCCACCAAGCAAGCAGAATCTGTTCAGATTAAATCCTAG 1029 0.4917 MPAAAADATTTPSGSGQTICVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLKELEGALERLTLHKVDLLDLESVKAVVNGCDGVIHTASPVTDNPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPSRSIDAVVDESCWSNLEYCKNTKNWYCYGKAVAEQAAWDEAKARGVDLVVVNPVLVLGPLLQSAINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHILVYETPSASGRYLCSESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRAKPYTFSNKKLKDLGLEFTPVDQCLYDTVKSLQDKGHLPLPTKQAESVQIKS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5939g00002 342 Pfam NAD dependent epimerase/dehydratase family 19 250 IPR001509 -
Pral5939g00002 342 CDD FR_SDR_e 20 306 - -
Pral5939g00002 342 Gene3D - 8 342 - -
Pral5939g00002 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 322 IPR036291 -
Pral5939g00002 342 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 18 319 - -
Pral5939g00002 342 FunFam Cinnamoyl-CoA reductase 1 10 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5939g00002 Pral-Chr5939 21117 24122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5939g00002 16 282 Monolignol Biosynthesis Gene Families AT1G80820 76.030 3.73e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5939g00002 K09753 - gmx:100789070 578.17