Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5937g00004 ATGGGACATAGTGTAAACATTCTCGTCAAGAAGAGACAAACATTTGAAACCATAGTCTCTGTTGTTTTTTTAGTCCAAGGAACTTTTACCACAAGAGAGATGGCCAATGAGGAAACTCCAGCAGTCCCTTCAACACCTGCAACTCCAGGGACTCCTGGTGCTTCACTGTTTGGTGGGAATGGAATAGGTAAAAAATCCATTGTCATGAGCAAGTGTTTCAGTGCTGAGGAATGGACCTTGGAAGAAGGAGGCTTACCCAAAGTCTCTTGCTCATTGCCTCCCCCTCCTGTTCCCCCTCCTGTTCCTCTAGGAAGAAAGGTAGGAGCTGAGTTTGTAGGAACTTTGATTCTCATGTTTGCTGGTATTTCCACTGCTATTGTTAACCAAAGGACACCAGGTTCTGAGACTCTGATTGGGTGTGCTGCCTCTACCGGTATTGCTGCTATGGTCGTCATCCTTGCCACCGGTCACATCTCCGGTGCTCATCTCAATCCTGCAGTCACCATTTCCTTTGCTGCTTTAAAGCACTTCCCATGGAAACATGTTCCTCTGTATATTGGCGCACAAGCTGTGGCGTCCATATGCGCAGCATTTGCAGTAAAGGGGATATTCCACCCCGTCATGAGTGGAGGAGTCACAGTACCTTCAGGAGGATTTGCTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAATCTCATGTTTGTTGTCACAGCAGTGGCCACCGACACAAGAGCTGTGGGGGAGCTTGCTGGGATTGCAGTGGGAGCGACTGTCATGCTTAACATACTTATAGCCGGGCCAGCAACAGGAGGATCAATGAACCCAGCGAGAACACTAGGTCCAGCTATTGCTGCAAGTAACTACAAAGACATATGGGTCTACCTCATTGCTCCTATACTGGGAGCCCTTAGTGGGGCAGGAATCTACACTGCAGTCAAGCTTCCAGAAACAGACGGTGAAACACAAGGAAAAGCTTCAACACCCCGAAGCTTCAGAAAGTGA 1005 0.4776 MGHSVNILVKKRQTFETIVSVVFLVQGTFTTREMANEETPAVPSTPATPGTPGASLFGGNGIGKKSIVMSKCFSAEEWTLEEGGLPKVSCSLPPPPVPPPVPLGRKVGAEFVGTLILMFAGISTAIVNQRTPGSETLIGCAASTGIAAMVVILATGHISGAHLNPAVTISFAALKHFPWKHVPLYIGAQAVASICAAFAVKGIFHPVMSGGVTVPSGGFAQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPARTLGPAIAASNYKDIWVYLIAPILGALSGAGIYTAVKLPETDGETQGKASTPRSFRK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5937g00004 334 SUPERFAMILY Aquaporin-like 103 319 IPR023271 -
Pral5937g00004 334 ProSitePatterns MIP family signature. 162 170 IPR022357 -
Pral5937g00004 334 Gene3D Glycerol uptake facilitator protein. 101 326 IPR023271 -
Pral5937g00004 334 MobiDBLite consensus disorder prediction 34 56 - -
Pral5937g00004 334 MobiDBLite consensus disorder prediction 34 51 - -
Pral5937g00004 334 Pfam Major intrinsic protein 105 310 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PANTHER AQUAPORIN NIP2-1 85 318 IPR034294 -
Pral5937g00004 334 CDD MIP 105 310 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 FunFam Aquaporin NIP2-1 95 325 - -
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 144 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 256 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 225 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 293 313 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 181 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5937g00004 334 PRINTS Major intrinsic protein family signature 105 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5937g00004 Pral-Chr5937 23587 26618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5937g00004 34 334 Major Intrinsic Protein MIP AT1G80760 72.204 3.19e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5937g00004 K09874 - cave:132187749 454.136