Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5935g00001 ATGGCCCGAGTCAACGCGCAGGCCCCGCATCAGAGTCAGAACGAGAACGACTCGCCCCGGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGGTCCTGGGTCAGGGAAACTTCGCCAAGGTGTATTACGCCAGGAACCTTGTGACGAACGAGAGCGTCGCGATTAAGGTCATCAAGAAAGAGAAGCTCAAGAAAGAGAGGCTCGTGAGGCAGATCAAGCTGGAGGTTTCCGTGATGCGATTGGTCCGGCATCCTCACATCGTCGAGCTCAAGGAAGTTATGGCCACAAAAGGAAAGATCTTTCTGGTCATGGAATATGTCAAAGGTGGAGAATTGTTCTCCAAGGTTGCTAAAGGCAGGCTTAAGGAAGATGTCGCGAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCATCGTGATCTGAAGCCTGAGAACCTTCTTTTGGACGAGAACGAAGATCTGAAGGTTTCTGATTTTGGGTTGTCGGCACTGCCGGAGCAGCGTCGAGCCGACGGAATGCTCGTGACGCCGTGTGGAACGCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGGTATGATGGATCCAAAGCTGATATTTGGTCATGTGGTGTGATTCTCTATGCTCTTCTTTCTGGGTATCTGCCATTTCCGGGTGAGAATATTATGAAGATTTACAAGAAGGCATTCAAAGCTGAGTACGAATTACCAGATTGGATTTCACCCGAAGCTAAGAATTTGATCTCTAATCTTCTTGTCGCCGACCCAGAAAAGAGATATTCGATCCCAGATATCATGAAGGACCCATGGTTTCAAATCGGGTTCATGAAACCAATCGCGTTCTCGATAAAGAAGGAACCAGGTTTCGATTTCGACGAGGAGGAGAATGAAATTAAAGAGAAAGAAGGAGGAGAAGCAGTAGTAAGATCAGAAAAACCGTCCCGACCATTTTACAATGCGTTTGAGATAATCTCATCTCTGTCAAATGGGTTTGATCTGAGGAGCTTGTTCGAGACACGAAAGAGGTCTCCGTCGATGTTCCTGTCCAAGCTTTCAGCTCCGACGGTTGTGGCGAAGCTGGAGACGGTGGCGAAGAAGCTGAATTTTAAGATAACAGGGAGGAAGGATTTCAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTGTCCAAGTCATCTGGCGATACGCTCGAGTACATGAAGTTCTGTGAGGATGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGCTGGCAAGGAGACAGTACTAACAACAACAACAACAACAACAATAATTCTCAAAATTAA 1401 0.4875 MARVNAQAPHQSQNENDSPRSILFNKYEMGRVLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKLEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGRLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFPGENIMKIYKKAFKAEYELPDWISPEAKNLISNLLVADPEKRYSIPDIMKDPWFQIGFMKPIAFSIKKEPGFDFDEEENEIKEKEGGEAVVRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPTVVAKLETVAKKLNFKITGRKDFKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVELSKSSGDTLEYMKFCEDEVRPALKDIVWSWQGDSTNNNNNNNNNSQN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5935g00001 466 ProSiteProfiles NAF domain profile. 323 348 IPR018451 GO:0007165
Pral5935g00001 466 Gene3D Transferase(Phosphotransferase) domain 1 20 327 - -
Pral5935g00001 466 MobiDBLite consensus disorder prediction 1 20 - -
Pral5935g00001 466 Gene3D Kinase associated domain 1, KA1 328 448 - -
Pral5935g00001 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral5935g00001 466 FunFam Non-specific serine/threonine protein kinase 20 323 - -
Pral5935g00001 466 FunFam Non-specific serine/threonine protein kinase 19 106 - -
Pral5935g00001 466 CDD CIPK_C 329 443 - -
Pral5935g00001 466 SUPERFAMILY Protein kinase-like (PK-like) 23 282 IPR011009 -
Pral5935g00001 466 Pfam NAF domain 327 382 IPR004041 GO:0007165
Pral5935g00001 466 ProSitePatterns Protein kinases ATP-binding region signature. 33 60 IPR017441 GO:0005524
Pral5935g00001 466 SMART serkin_6 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5935g00001 466 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5935g00001 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 443 - -
Pral5935g00001 466 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5935g00001 466 FunFam Non-specific serine/threonine protein kinase 323 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5935g00001 Pral-Chr5935 2732 4734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5935g00001 22 464 CBL-interacting serine-threonine protein kinases AT5G25110 63.205 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5935g00001 Pkinase 6.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5935g00001 - - gmx:100812424 681.404