Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5933g00004 ATGCCTTCCAGATCCATCCTTTCCAGTCCCAACCCTCCAAGTCCAAGTTTTTTCATTAAAACCAGAGTCATCTTCCTCGCCCTCACAATCTCAGCGTCTGTTGTAATTGTATGCTCGCTCATATACTTTCTTTACCACTTATGGCATTCCATGGTACACAGAGCTAAAACTATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTGGAAAGATTCTCGTACAAAGAACTGAAGCAGGCCACCAATGGCTTTGACGCCGCCAATGTAATTGGTAAAGGAGGGTCTGGAACTGTCTTCAGAGGAACCCTTAAAGACGGGAAATTGATTGCAATTAAGAGGCTAGACGCCTTGTCTTTACAAACAGAGCGAGAGTTTCAGAATGAGCTTCAGATTCTAGGTGGGTTAAGATCTCCTTTTATTGTGACCCTTTTGGGGTATTGTGTGGAGAAGAACAAGAGAGTGTTGGTGTATGATTACATGCCCAATAAAAGCTTGCAGGAGTCTCTGTTTGGAGATGATGGGTGTTTGAGTTTGAGCTGGGAGAGAAGATTCCACATCATTCTGGATGTTTCTAGAGCCTTGGAATTCTTGCACCTTGGTTGTGATCCTCCAGATCATGGGGATGTTAAGCCGAGCAATGTTCTTCTTGATTCAGAGTTCCGTGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAATTTGGTGTGGATTTGTTTAGCCAGGACTTGGGGAAGAGTCAAGAGCTATGGAAGAGCGAAGAGCTTTCAGGTAATTTAACTGCTGAAACCCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTTAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCATCTAAAAATAGCAAGACATGTTTTAATGTTAAAGCTTTGAGCTTGAATTCTTTCAATTATAATGCCAATATTGCCAATGAGAGCGAAATCAGGAGTTGTAATGCAAAGGGAAAGGAAATATCAACTCTAGATATTGGTGGAGTTGACTGGAACCAGAAATTTGTTCCTTATGATGATGAGTTTTCTAGCATTGATCACAGTAAGGAATTAAGTACTGTAAATGCTTCTTCTGTGGATGAAGTGAAAATAAATGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAGCATGGAACTGATGAATTATGTAGTAGAGACTATGTGATGGAGTGGATAGGGAGTCAGATTGGTCCATCGAACCCAGATTGGGTAGAAGAAAAGAAGAACATTAATGAAAAAGCCGAGTTGGAAACTTCAAGTCCAGTGGATCATAAACCAGATGAAGCAAATGGCCAATTACAAGCATTTGGAGGGGGTGATACAGATAATGTGGTTGAGAAGAAAGAAGCAAGGGGGAAGAAAAACCGAAAGAAAAAGCCCAGGAAGATGCAGGAATGGTGGAAAGAAGAGCACCTTGCAGAACTAAGCAAGAAGAGGAGTAAGCTGAAGAATCTTCAAACCAAGTGGAAGAAAGGCTTGAAAGTGCCACATTTTGACTTGGGAAGAAGGTTTTATCTTTGCAGGCGAAGAAACTTCACTGAAGAAGCTCAGGATGAGAGCGATCAAAATGGCGAGTTCAGTTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATTGGCAGCGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACCAGTATGAGAGGAACACTGTGTTATGTTGCACCAGAATATGGAGGGTGTGGATACTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATCGTGTCTGGTAGAAGACCATTACATGTTCTTGCATCTCCCATGAAGCTAGAGAAAGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATTTTAGAACTAGTAGATGAGAGACTGAAAGATTACAACAAGGAGCAAGCAAGCTTGTGCATCAACCTGGCACTTGCTTGCTTACAGAAAATTCCAGAATTGAGGCCCGAAACCGGGGATATTGTCAAGATTTTGAAGGGCGACATGGACCTTCCACCGCTGCCATTCGAGTTTTCACCATCTCCTCCTTCCAAGTTTTACAGCAAATCAAGGACAAAACAAAAGAAAACTACAGAATAG 2154 0.4239 MPSRSILSSPNPPSPSFFIKTRVIFLALTISASVVIVCSLIYFLYHLWHSMVHRAKTIPFDSSAPLKLERFSYKELKQATNGFDAANVIGKGGSGTVFRGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNKSLQESLFGDDGCLSLSWERRFHIILDVSRALEFLHLGCDPPVXHGDVKPSNVLLDSEFRGKISDFGLSRIKVENEFGVDLFSQDLGKSQELWKSEELSGNLTAETPTPAIGTPVESVNEVDFALALQASSSSKNSKTCFNVKALSLNSFNYNANIANESEIRSCNAKGKEISTLDIGGVDWNQKFVPYDDEFSSIDHSKELSTVNASSVDEVKINGKQWGKDWWWRQHGTDELCSRDYVMEWIGSQIGPSNPDWVEEKKNINEKAELETSSPVDHKPDEANGPXLQAFGGGDTDNVVEKKEARGKKNRKKKPRKMQEWWKEEHLAELSKKRSKLKNLQTKWKKGLKVPHFDLGRRFYLCRRRNFTEEAQDESDQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLKDYNKEQASLCINLALACLQKIPELRPETGDIVKILKGDMDLPPLPFEFSPSPPSKFYSKSRTKQKKTTE 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5933g00004 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pral5933g00004 719 SUPERFAMILY Protein kinase-like (PK-like) 62 705 IPR011009 -
Pral5933g00004 719 SMART serkin_6 83 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5933g00004 719 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Pral5933g00004 719 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Pral5933g00004 719 FunFam Receptor-like serine/threonine-protein kinase At4g25390 543 691 - -
Pral5933g00004 719 Pfam Protein kinase domain 86 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5933g00004 719 Gene3D Transferase(Phosphotransferase) domain 1 159 271 - -
Pral5933g00004 719 Gene3D Transferase(Phosphotransferase) domain 1 541 690 - -
Pral5933g00004 719 MobiDBLite consensus disorder prediction 429 457 - -
Pral5933g00004 719 FunFam putative receptor-like protein kinase At1g80870 159 270 - -
Pral5933g00004 719 Coils Coil 482 502 - -
Pral5933g00004 719 MobiDBLite consensus disorder prediction 694 719 - -
Pral5933g00004 719 ProSiteProfiles Protein kinase domain profile. 83 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5933g00004 719 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Pral5933g00004 719 PANTHER OS07G0586332 PROTEIN 1 714 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5933g00004 Pral-Chr5933 37204 39746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5933g00004 554 685 Receptor kinase-like Gene Family AT3G58690 31.343 8.95e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pral5933g00004 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5933g00004 - - gmx:100800845 1110.9