LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5933g00003	ATGGCAGACCTCAAAGAGCGGCTATTACTTCCCCCAAAACCAGCATCAGCCCTTAATTTGAGAGAGCCAGTCAATCGACCATCAGCATCTGGAAGGCAACCCTTACAAGGAGTGGATGTGTTGGGGCTAAAGAAGCGGGGTCAAGGTCTTCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAGGCTATTGAAGTAGACAAGTTCACTATGATGCGACGGTGCGATCTACCTGCACGTGATCTTCGCCTGCTAGATCCTTTGTTTGTGTATCCATCAACTATCTTGGGAAGAGAAAAGGCTATTGTTGTAAATCTTGAGCAGATACGGTGTATTATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTAGATAGTTATGTATTACACTATGTGATGGAGTTGCAACGCCGGCTAACTACTGCAGGGGTAGGTGATGTTTGGCAGTCAGAAAATTCTGATATGAGCCGAAGAAGAGGAAGTAGGAGTTTTGACAATGCCTTTAACAACACATCCCCTGATTATCTGCCTTTTGAGTTTAGAGCTCTTGAAGTTGCCTTGGAGTCAGCATGCACATTTCTTGACTCTCAGGCAGCAGAATTAGAAATTGAGGCCTATCCTTTACTGGATGAGTTAACATCAAAGATCAGTACATTAAATTTGGAACGTGTTCGTCGCTTGAAAAGTAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGATGGCGATATGGCTGAAATGTACCTCACTGAGAAGAAAAGTCGGATGGAGTCATCATTTTTTGGAGATCATCAGTCTTCGATGGGATATAAATCAAATGATGCTGCATCAATTTCCGCACCAGTTTCTCCTGTTTCTTCACCTCCTGATGCTCGGAGGCTTGACAAATGTTTGAGCATTGCAAGGAGTCGACATGAAAGCATGAAAAGTACAGAAAGTGCTACAGACAGTATAGAAGAGCTTGAGATGTTGTTGGAAGCTTACTTTGTTGTAATTGATAGCACCTTGAACAAGTTGACGTCGTTGAAAGAGTACATTGATGACACAGAAGATTTCATAAACATCCAACTGGACAATGTGCGCAATCAGCTGATCCAATTTGAGCTTTTACTCACAACGGCAACATTTGTGGTTGCCATTTTTGGCGTGGTAGCTGGAGTATTTGGAATGAACTTTGAAATCCCATTATTTGATGTGCCCCATGCATTCAGCTGGGTCATTATAATTACTGCAATTTGTGGGGTCTTGATATTTTCTGCCTTTGTGTGGTTCTTCAAATACAGAAGGCTCATGCCCCTATAG	1338	0.4253	MADLKERLLLPPKPASALNLREPVNRPSASGRQPLQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTAGVGDVWQSENSDMSRRRGSRSFDNAFNNTSPDYLPFEFRALEVALESACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMESSFFGDHQSSMGYKSNDAASISAPVSPVSSPPDARRLDKCLSIARSRHESMKSTESATDSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFDVPHAFSWVIIITAICGVLIFSAFVWFFKYRRLMPL	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5933g00003	445	CDD	Mrs2_Mfm1p-like	53	442	IPR039204	-
	Pral5933g00003	445	Gene3D	Magnesium transport protein CorA, transmembrane region	131	376	-	-
	Pral5933g00003	445	Coils	Coil	225	252	-	-
	Pral5933g00003	445	Gene3D	-	40	124	-	-
	Pral5933g00003	445	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	21	443	IPR039204	-
	Pral5933g00003	445	FunFam	Magnesium transporter MRS2-1	41	124	-	-
	Pral5933g00003	445	FunFam	Magnesium transporter MRS2-1	383	443	-	-
	Pral5933g00003	445	Gene3D	Magnesium transport protein CorA, transmembrane region	383	443	-	-
	Pral5933g00003	445	Pfam	CorA-like Mg2+ transporter protein	335	433	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Pral5933g00003	445	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	382	435	IPR045863	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5933g00003	Pral-Chr5933	29913	33873	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5933g00003	1	445	MRS2 Gene Family	AT1G16010	85.426	0.0	753