Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5928g00009 ATGGTTGTGCTCAAGAAGAAGGAAGATGCTTCAAGGTCGTCCTCATCTCCTTCTTCGTTCATCTTCATATTCTGTTCATGCTGCTCCATCCTCAACGGCGTCGTTTCGGACCCACAGACCAATCTTCTTAAGAGCGAGTGTAATCCGTCCTTCGTCTACCTCGTGTCCAGCATCTCCATCTTCGACAGAAACCTAAACGCGACGTTGAGAGATATCAGAGGGCAGATCAGTGAACAGAACAAGCACTTCGCCACCGCACATGAAGGTAACGGAGGAAACCCAGTTTCCACTCTTCTCCAATGCAGAAACTACCTCTCCATCGCCGACTGTCTTGATTGCTTCGACGTCGCCGCCGCTCGAATACTCAGCTGCACCGCCGGAGCCTCGGGTGCCCATGTTGTCTACGACGGCTGCTTCCTCAGGTTCGACATTAGCGGTGCTTTCCTTGATGAGACAACACAAACTTTCAACACAGCATATTGTGGTAATCAGACTGAAGATGACGATGGAGCCACAAGACTCACATCAGTTGCACAACAATTGCTGATGAATCTTCAAACTGTAACACCAAATATCAGAGGATCTTCTGCAGCCATGAAGATGACAGTGTCTAACGTTGGTCCAACTATTTATGCCTTTGCCCAATATGGTAGGGCTTTTGCCGATGGGTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGATAACCAGACTATTGATATCGTACCTGCCTTCAAACAAGGTTCAAGTAACAAGGGGGCCATTGCTGCTGGAGTTGTTTCAGGTGCTGCTCTTGCTTTGCTCCTCGTTGCATTATTTGCTTGGATGAGACGAACTAAAAGCCCAAAGAGGGTTCCTAGAGGAGAGATACCTGGAGCGAGTAAGTTGAAAGGCTCAATAACTTTTAGTTATAAGGATTTAAAGTCTGCAACTAAGAATTTTAGTGACGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGCATTTTGGGGAATGGGAAAGTAGTTGCAGTAAAGAAATTAGCTTTACGAGCCTCCAATAGGATCGATGAAGATTTTGAGAGTGAAGTGATGCTGATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTTTGGGATCTTGTAGCAAAGGTCACGATAGAATCCTTGTTTACGAATACATGAAAAACAACAGTCTTGACAGATTCTTATTTGAGGATACACTGCACCAGAGTATGCAATTCATGGACAACTATCCGAAAAGGCTGATATTTATAGTTATGGTATTGTTGTCTTAG 1290 0.4419 MVVLKKKEDASRSSSSPSSFIFIFCSCCSILNGVVSDPQTNLLKSECNPSFVYLVSSISIFDRNLNATLRDIRGQISEQNKHFATAHEGNGGNPVSTLLQCRNYLSIADCLDCFDVAAARILSCTAGASGAHVVYDGCFLRFDISGAFLDETTQTFNTAYCGNQTEDDDGATRLTSVAQQLLMNLQTVTPNIRGSSAAMKMTVSNVGPTIYAFAQYGRAFADGCFMRYSTTSFFPDNQTIDIVPAFKQGSSNKGAIAAGVVSGAALALLLVALFAWMRRTKSPKRVPRGEIPGASKLKGSITFSYKDLKSATKNFSDENKIGEGGFGVVYKGILGNGKVVAVKKLALRASNRIDEDFESEVMLISNVHHRNLVRLLGSCSKGHDRILVYEYMKNNSLDRFLFEDTLHQSMQFMDNYPKRLIFIVMVLLS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5928g00009 429 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Pral5928g00009 429 SUPERFAMILY Protein kinase-like (PK-like) 296 407 IPR011009 -
Pral5928g00009 429 Gene3D - 39 145 IPR038408 -
Pral5928g00009 429 ProSiteProfiles Protein kinase domain profile. 315 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00009 429 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Pral5928g00009 429 SMART tyrkin_6 315 428 IPR020635 GO:0004713|GO:0006468
Pral5928g00009 429 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 67 405 - -
Pral5928g00009 429 Pfam Salt stress response/antifungal 58 143 IPR002902 -
Pral5928g00009 429 FunFam Cysteine-rich receptor-like protein kinase 2 281 391 - -
Pral5928g00009 429 Gene3D Phosphorylase Kinase; domain 1 282 391 - -
Pral5928g00009 429 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Pral5928g00009 429 Pfam Protein tyrosine and serine/threonine kinase 318 404 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5928g00009 Pral-Chr5928 114341 121872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5928g00009 81 424 Receptor kinase-like Gene Family AT5G40380 32.418 6.84e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5928g00009 PK_Tyr_Ser-Thr 1.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5928g00009 - - pcin:129301902 450.669