Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5928g00002 ATGCTGCTTCGCCTGCAACAGAAGCCCTTCTTCTTCTTCTTGTTGAGCTTCACAATCTGGTCATGGTGGACGCTTGACGGCGTCGTTTCAGAGCCTCAGACGATTTTTGTGAGGATAGGGTGCAGCCAAATCAACGTCAGCGATGTGTCCATCTTCCAGAACAACCTAAACGCAACGTTTCGAGACATGAGAGCGCAGATCAGCAACCAAAGCAAACACTTCACCACGGCGGAGGTAGTAAAGGGTGACAACCCCACTTATGGGCTTTTTCAATGCAGAAACTACCTCTCCATTGCCGACTGTCTCTCTTGCTTCGACTTCGCCGCCGTCCAGATACGCAACTGCTCTGCCTCCGTCGACGGTGCCCAAATCATATACGACGGCTGCTTGCTCCGGTACGAGAGCAATACCTTCTTTAACCAGTCCACAGACGCAGGAAACAACATTTATTGTGGGAATGAAACAAGAAATTCAACTGAACTTGCTTCAACTGTGCAACAAGTGATAAAGAATCTGGAAATAGCCACTCCAAGAATCAATGGAGATGCAAGCACGAAGAAGGCCATTATTGGTGGAGTCGTGGGAGGAGTATCTACTATTTTGATTATCCTTGCATTATTTGCTTTGTATATTCGAGCAAAATCATCCAAGACGGTTCCTACAGGTGATATTTTGGAAGCAACTGAGTTAAAAGGCCCGGTCAATTACAGGTATAAAGATCTAAAGTCAGCGACAAAAAATTTCAGTGAAAAAAATAAACTAGGAGAACAAGCCTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTAGTTGCTATCAAGAAATTGGTTTTAGGCCAATCCAAACAGACAGAGAAAGAATTTGTGAGTGAAGTGAAGTTGATAAGTAATATTCATCATCGAAATATTGTTCGGCTTCTGGGATGTTGCAATAAAGGCCAAGAGAGATTTCTTGTCTATGAATACATGAAAAACAAAAATGTTGGCCAATTCTTATATGGTGAAAATAAAGGTTCTCTTAATTGGGCACAACGTTATGGAATAATTTTGGGCACTGCAAGAGGCTTGGCATATCTTCATGAGGAATTTCATATTTGTATCATACATAGAGATGTAAAAACTAGCAACATTCTCTTGGGTGATGATTTTCAGCCTAAAATTTCTGATTTTGGATTGGCAAAGCTTTTGCCAAGAGACCAATCTCGTCTCAATGAACCATTTGCTGGAACAATGGGATACGTGGCACCTGAATATGCAATGCATGGACAATTATCAAAAAAAGTTGATACTTCTAGCTATGGTGTTGTTGTCCTAGAAATCATAAGTGGAGAAAAAAGTAATTCATTGAAGGTTGATGATAGTGGTGAATATCTCCTTCAAAAAGCTTGGAAACTATATGAGAGAGGAATGCATATAGAGTTTGTGGACGAAACCTTAGACACAAAGGAGTATCATGTAGAGGAAGTCAAGAAAATCATAGAGATTGGGTTGCTTTGCACACAAGCATCTCCTGTAGCAAGGCCAAAAATGTCTCAAATTGTTAGAATGCTCAAAAGAAAGAGCTTAATGGAGCATGACCTGCCTACTATGCCTATTTATGTGCATCCTAGATTTGGATCCAGAAGAGAAACCTTGGTGAATAATGGTTCATCTTCATCAAATGCTACTATGTCCACTTCCACTCTATCAGGAAGGTGA 1704 0.4085 MLLRLQQKPFFFFLLSFTIWSWWTLDGVVSEPQTIFVRIGCSQINVSDVSIFQNNLNATFRDMRAQISNQSKHFTTAEVVKGDNPTYGLFQCRNYLSIADCLSCFDFAAVQIRNCSASVDGAQIIYDGCLLRYESNTFFNQSTDAGNNIYCGNETRNSTELASTVQQVIKNLEIATPRINGDASTKKAIIGGVVGGVSTILIILALFALYIRAKSSKTVPTGDILEATELKGPVNYRYKDLKSATKNFSEKNKLGEQAFGDVYKGTLKNGKVVAIKKLVLGQSKQTEKEFVSEVKLISNIHHRNIVRLLGCCNKGQERFLVYEYMKNKNVGQFLYGENKGSLNWAQRYGIILGTARGLAYLHEEFHICIIHRDVKTSNILLGDDFQPKISDFGLAKLLPRDQSRLNEPFAGTMGYVAPEYAMHGQLSKKVDTSSYGVVVLEIISGEKSNSLKVDDSGEYLLQKAWKLYERGMHIEFVDETLDTKEYHVEEVKKIIEIGLLCTQASPVARPKMSQIVRMLKRKSLMEHDLPTMPIYVHPRFGSRRETLVNNGSSSSNATMSTSTLSGR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5928g00002 567 MobiDBLite consensus disorder prediction 546 567 - -
Pral5928g00002 567 SUPERFAMILY Protein kinase-like (PK-like) 236 546 IPR011009 -
Pral5928g00002 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Pral5928g00002 567 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Pral5928g00002 567 FunFam Cysteine-rich receptor-like protein kinase 2 33 138 - -
Pral5928g00002 567 Gene3D - 33 138 IPR038408 -
Pral5928g00002 567 Gene3D Transferase(Phosphotransferase) domain 1 325 530 - -
Pral5928g00002 567 FunFam Cysteine-rich receptor-like protein kinase 2 213 324 - -
Pral5928g00002 567 Pfam Salt stress response/antifungal 44 135 IPR002902 -
Pral5928g00002 567 CDD STKc_IRAK 254 521 - -
Pral5928g00002 567 Pfam Protein tyrosine and serine/threonine kinase 251 519 IPR001245 GO:0004672|GO:0006468
Pral5928g00002 567 FunFam Cysteine-rich receptor-like protein kinase 2 325 527 - -
Pral5928g00002 567 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 66 553 - -
Pral5928g00002 567 ProSiteProfiles Protein kinase domain profile. 248 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00002 567 SMART serkin_6 248 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00002 567 Gene3D Phosphorylase Kinase; domain 1 211 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5928g00002 Pral-Chr5928 35564 38806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5928g00002 48 540 Receptor kinase-like Gene Family AT4G23230 37.008 3.08e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5928g00002 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5928g00002 - - gmx:100813585 531.176