Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5928g00001 ATGCAGCCACCACTACTGCAACAAAAGCATCTGTTGTTCTTCTTATTGAACATCATAACCTGGTCATGGTTGACTCTGGGCGGCGTCGTTTCGGACCCTCAGGCCAATCTAGTGCGACTATGGTGTGACCAAGACGGCGACGGCGACGGATCCATCTATTGGACAAACAACGACGGGTCCATCTTGAAGGGGATCCTAGACGAAACGCTTCAAGACCTGAGAGCTCAGATCCAAAACCAAAACCAACACTTCACTACAGCTCAGGCAGTGAAGGCTAACATCCCCATTTATGGTCTTTTTCAGTGCAGAAACTACCTCTCCATCGCCGACTGCCTCGCTTGTTTCGATGTCGCCGCCGTCAACATCCGCAACTGCTCCACCACGGCATATGGTGCCCGTCTCGTCTACGAAGGCTGCTTCCTCAGGTACGAGAGCAGCAAACATTTTGATCTGGCCAGCGAAGTCGAGTGGAGCGACATAAGATGTGGGAATCAGACAATAATAGATTCCTCTGCGCTTGCTTCAACTGTACAACAAGTGTTGAGGAATCTAGACGTAGCAACCCCAAGAATGAGTGGATTTTATGCAGCCACTAAGACGCCTGTTCCTAATAGTAATGGTTTGAATGTTTATGCGATTGCTCAATGTGTTCAGACCCTCTCACAGAGTGGGTGCCAGAATTGCATGAAATCTGTATCAGAAAAATTTCAGACTTGTCTTACAAACTCAAATGCTGAGAGTTACGATACTGGCTGTTTCATGAGATACTCCACAACTTCTTTCTTTCCTGGTAATCAAACCACTGATATCAACCACTTCTTGAAACAAGCTGGTTCAAGCAATAAGGGAGCCATCATTGGTATTGTTATTGGAAGTCTAGTGCTGGTTTTGATCTTCCTTATGACATTATTTGCCTGGATTAGACCACGAAGAAGCCAAAAGAGAGTTCCCAAAGGAGATGTAACTGGAATAAGTAAGTTGAAAGCCCCAGTTAACTACAATTATAGGGATTTGAAGTCTGCAACAAAAAATTTCAGCATTGAAAATAAACTTGGGGAAGGTGGATTTGGAGCAGTATATAAGGGAACTTTGGAGAATGGAAAAGTAGTTGCAGTGAAGAAATTAACTTTACGACAATCAAAGAGGATGGAGGAAGAATTTGAGAGTGAAGTAAAGCTCATTAGCAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGCTGTAAAGGCGATGAGAGAATTTTGGTCTATGAATACATGGAAAAGACCAGTCTTGACAAATTCATATTTGGAAAAAAGAAAGGTTCACTTAATTGGAACCATCGATGGGATATAATTTTAGGAACAGCAAGGGGTTTAACTTATCTACATGAAGAATTTCATGTTTGCATCATACATAGAGATATAAAGACTAACAACATCCTATTAGATGATGATTTGCAACCTAAAATTGCTGATTTTGGTTTAGCAAAGCTCTTACCCGAAGACAAATCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATGCAGCACCAGAATATGCAATTCATGGACAATTATCAGAGAAGGTTGATATTTATAGCTACGGTGTTGTGGTGCTAGAAATTATTAGTGGTCAAAGAAACAGTGAATTAAAGCTCGATGGTGATGAGGAAGGCGAATTTCTCCTTCAGAAAGCTTGGAACTTATATAGGAAAGGCATACATTTAAAGTTGATTGATGATACCTTAGACCCCAATGATTATGATGCAGAGGAAGTGAAGAAAATCATAAAGATTGCCTTACTTTGCACACAAGCATCTGCGGAATTAAGGCCAAAAATGTCTGAAGTAGTTGTTTTGCTCCAACAAGAATGTTTATCAGAGGATATAAGACCCACTATGCCTATTTTGATTGAAATTAAGTAG 1917 0.4105 MQPPLLQQKHLLFFLLNIITWSWLTLGGVVSDPQANLVRLWCDQDGDGDGSIYWTNNDGSILKGILDETLQDLRAQIQNQNQHFTTAQAVKANIPIYGLFQCRNYLSIADCLACFDVAAVNIRNCSTTAYGARLVYEGCFLRYESSKHFDLASEVEWSDIRCGNQTIIDSSALASTVQQVLRNLDVATPRMSGFYAATKTPVPNSNGLNVYAIAQCVQTLSQSGCQNCMKSVSEKFQTCLTNSNAESYDTGCFMRYSTTSFFPGNQTTDINHFLKQAGSSNKGAIIGIVIGSLVLVLIFLMTLFAWIRPRRSQKRVPKGDVTGISKLKAPVNYNYRDLKSATKNFSIENKLGEGGFGAVYKGTLENGKVVAVKKLTLRQSKRMEEEFESEVKLISNVHHRNLVRLLGCCCKGDERILVYEYMEKTSLDKFIFGKKKGSLNWNHRWDIILGTARGLTYLHEEFHVCIIHRDIKTNNILLDDDLQPKIADFGLAKLLPEDKSHLSTRFAGTLGYAAPEYAIHGQLSEKVDIYSYGVVVLEIISGQRNSELKLDGDEEGEFLLQKAWNLYRKGIHLKLIDDTLDPNDYDAEEVKKIIKIALLCTQASAELRPKMSEVVVLLQQECLSEDIRPTMPILIEIK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5928g00001 638 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Pral5928g00001 638 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00001 638 Gene3D - 54 148 IPR038408 -
Pral5928g00001 638 Gene3D - 155 261 IPR038408 -
Pral5928g00001 638 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Pral5928g00001 638 Pfam Protein kinase domain 346 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00001 638 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5928g00001 638 ProSiteProfiles Gnk2-homologous domain profile. 44 148 IPR002902 -
Pral5928g00001 638 CDD TM_EGFR-like 284 315 - -
Pral5928g00001 638 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 98 632 - -
Pral5928g00001 638 FunFam Cysteine-rich receptor-like protein kinase 2 422 626 - -
Pral5928g00001 638 FunFam Cysteine-rich receptor-like protein kinase 2 311 421 - -
Pral5928g00001 638 Pfam Salt stress response/antifungal 65 145 IPR002902 -
Pral5928g00001 638 Pfam Salt stress response/antifungal 168 258 IPR002902 -
Pral5928g00001 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pral5928g00001 638 Gene3D Transferase(Phosphotransferase) domain 1 422 628 - -
Pral5928g00001 638 CDD STKc_IRAK 351 620 - -
Pral5928g00001 638 ProSiteProfiles Gnk2-homologous domain profile. 155 261 IPR002902 -
Pral5928g00001 638 Gene3D Phosphorylase Kinase; domain 1 310 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5928g00001 Pral-Chr5928 8963 13214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5928g00001 11 629 Receptor kinase-like Gene Family AT1G70520 37.619 7.89e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5928g00001 Pkinase 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5928g00001 - - gmx:100813585 743.806