Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5927g00008 ATGGGTCGTGATTCTGCGACTTCTCTCGCCCCCGGATTCCGATTTCACCCCACCGACGAAGAAATCGTTCGCTACTACCTCAGGCGCAAGGTGTGTGGCAAATCCGTCCGGTTCAACCCTATTGCCGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCCTGTCAGTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGGAATGGGTCGAAGACTAATCGGGCTACGGAGAAAGGGTACTGGAAGACGACGGGGAAGGATCGTCCTGTCCGACACAGCTCGCGAATTGTCGGAATGAAGAAGACCCTGGTTTATCACAGTGGTCGAGCGCCGCACGGTACTCGTACCAATTGGGTTATGCATGAGTACAGAATGGCCGATGAAGAATTGGGGAATGCAGGAATAGCTCAGGATGCTTTTGTGCTCTGTAGGGTTTTCCAGAAGAGCGGTACCGGGCCAAAGAATGGAGAGCAGTACGGTGCCCCCTTTATAGAGGAGGAATGGGATGAGGATGAGGTGGCTCCGGTGTCAGGGGAAGGGGCTGTTACTGATGAAGTTTTAATGGGTGATGATGTTGATGCTTTCGTTGAAACAAACGACCTTGAGCAGAACCTCGATACGGACATAGCATCTGCTAGTGCTGCTGTTCCCGTCAACATGTGTTATGGGGAGAGTAGTAGCTACCCTGTACCTGAGTATTCCCAGGAAGCCACTGAAGACCAGAAGCCCTTTGTAAGCAGGGGTGAAACTTGTGAGCCTCAAGAGGGTCAGTTCCTGAATATACCTGAGCAGCATGCTGTGGACGGTAAAACATCGAAGGATGAATATAAAGCGGAAGCTTGGCATGATGGAAGTCCTCTTAACTTTAATCATTCACTTGATGATCTATACTTGGATGCTTTTGATTTTCCTCAGATCGGTGATGGTTCATTCCTGGAAACCAATGATCTTTTGAATCCCATTGAGGCGGATCTTGATACCAAGGACATGCTGGATGAGTATCTTAACTACTTGGACGCTGATGATGATATTTCCAAGTTTATATCTTTTGAGTCTCCTCAGATTAATGTAGAATCAGTTCCTGACCAAGGACTGCCTTTCATTCAGAATGTGGATGAGGAACCGAACATGGCATGCAAGCAGAAGTTTGATGAAGCACCTTGTAGTGATGGAGCTTCCTCTTCTAAGCAGAATCCTGAATTGTCAAAATCAGTACCAGGTGATATGAATCCATTGACAAAAAGGGCCAGTCGCTTGTTGGACAGCATCCCTGCGCCTCCTGCCTTTGCTTCAGAGCTTCCACCCAAAGACATTGCTCTTCGACTTCATTCTGCTGCTCAATCTTCCAATCATGTAACTGCAGGTATGATTAGAGTAACTAACATTACTCTTAGAGGTAACGGGATGGACTGGACGCTTGGCAAGAATGGAGGGTTCAACTTCGTGATCTCTTCTGATTTTTCTCAACCTAGTTATAATTCTGATGCGCTGGTCCCCGTTTCTGGCTTTCTATCTGGCAAGAGTGCCTGTTTGGTGTCACATTGCTGGTTTTTCTTGATGCTGTTTTCGGTTCTTATTCTTTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCCGGTAAATGA 1662 0.4741 MGRDSATSLAPGFRFHPTDEEIVRYYLRRKVCGKSVRFNPIAVIDIYKSEPWDLPCQSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVRHSSRIVGMKKTLVYHSGRAPHGTRTNWVMHEYRMADEELGNAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFIEEEWDEDEVAPVSGEGAVTDEVLMGDDVDAFVETNDLEQNLDTDIASASAAVPVNMCYGESSSYPVPEYSQEATEDQKPFVSRGETCEPQEGQFLNIPEQHAVDGKTSKDEYKAEAWHDGSPLNFNHSLDDLYLDAFDFPQIGDGSFLETNDLLNPIEADLDTKDMLDEYLNYLDADDDISKFISFESPQINVESVPDQGLPFIQNVDEEPNMACKQKFDEAPCSDGASSSKQNPELSKSVPGDMNPLTKRASRLLDSIPAPPAFASELPPKDIALRLHSAAQSSNHVTAGMIRVTNITLRGNGMDWTLGKNGGFNFVISSDFSQPSYNSDALVPVSGFLSGKSACLVSHCWFFLMLFSVLILSLSCKIGSCMYAAGK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5927g00008 553 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Pral5927g00008 553 MobiDBLite consensus disorder prediction 395 421 - -
Pral5927g00008 553 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Pral5927g00008 553 MobiDBLite consensus disorder prediction 399 415 - -
Pral5927g00008 553 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Pral5927g00008 553 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Pral5927g00008 553 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 245 - -
Pral5927g00008 553 FunFam Nac domain-containing protein 86 18 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5927g00008 Pral-Chr5927 42942 46280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5927g00008 1 550 NAC Transcription Factor Family AT5G04410 43.463 6.96e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5927g00008 NAM 1.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5927g00008 - - pcin:129312907 729.169