Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5927g00003 ATGGCTTTCCCGCTTCTCTTCCTTTGCTACTTCTTCCTCGTGACCATTCCATTCTCCTCCTCAGCTTCACACAAAAACCAGCTTTCTCTCGACTACTACAAGAAAACATGCCCTAAATTCCAGCAAACCGTCGCAGAACTCGTGTACAGCAAGCAATCCACCACCCCGTCCACCGCCCCCGGCGTTCTCCGCCTCTTCTTCCACGACTGCATCACCGACGGCTGTGACGCCTCCATCCTCATAAGCTCCAATGGTTACATGAAAGCCGAGCGTGACGCCGATCTCAACCTCTCCCTCTCCGCCGAAGCCTTCGACCTCATCCTCAAGATCAAGAACGCCCTCGAGCTCACCTGTCCCGGCGTCGTCTCCTGCGCCGACATCATGGCCCAATCGACCCGCGATCTGATCAAGATGGTCGGAGGGCCGTATTACACTGTGCCATTGGGACGAAAAGACAGTCTCTCATCAAACGCTTCGAAGGTCGATGCGGCCTTACCAAAGCCAGATTTCACCATGGACAAGATCATCGAGAAGTTCACGTCGAAGAACTTCACGGTCCGAGAAATGGTGGCTCTCACCGGCGGCCACACCATCGGATTCACCCATTGCAAGGAGTTCGCTCACAGGATCTTCGGTTTCAGCAAAACATCCCAGGTAGATCCGACGATGAATCCGAAACTGGTGGAAGGATTGAAGAAACTATGCGCGAACTACACGAAAGACCCATCAATGTCGGCGTTCAACGACATGAGATCGCCGGGCAAGTTCGATAACGCGTATTACCAGAACGTGCTGCATGGATTAGGGCTTCTGAGCTCAGATTCGCTTCTGGGAAGAGATCCGAGGACGAAGCCGATTGTTGAACAATACGCGAAAGATCAGAATGCGTTCTTCCAGGATTTCGCAAAGGCCATGGAGAAACTGGAGGTGCTTGGAGTGAAGACAGGGAAGGGCGGTGAAGTAAGGCAAAGGTGTGATCAATTCAACAACATGCGAGGTCATCCCACCGACGATTACGATCATGGAATGCCAATGGGTCATCGTCGTTCGGCAGCGGCTACAGTTGGTCTGTCGTCGTCGAAGTCCTCGGTGGTGATGCGTCGGCATCGGCTGGCGCTGGTGGGTCCGGATATGAAGGAGGAGTTTGATGATGGGAGATTTTGA 1164 0.5335 MAFPLLFLCYFFLVTIPFSSSASHKNQLSLDYYKKTCPKFQQTVAELVYSKQSTTPSTAPGVLRLFFHDCITDGCDASILISSNGYMKAERDADLNLSLSAEAFDLILKIKNALELTCPGVVSCADIMAQSTRDLIKMVGGPYYTVPLGRKDSLSSNASKVDAALPKPDFTMDKIIEKFTSKNFTVREMVALTGGHTIGFTHCKEFAHRIFGFSKTSQVDPTMNPKLVEGLKKLCANYTKDPSMSAFNDMRSPGKFDNAYYQNVLHGLGLLSSDSLLGRDPRTKPIVEQYAKDQNAFFQDFAKAMEKLEVLGVKTGKGGEVRQRCDQFNNMRGHPTDDYDHGMPMGHRRSAAATVGLSSSKSSVVMRRHRLALVGPDMKEEFDDGRF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5927g00003 387 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Pral5927g00003 387 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Pral5927g00003 387 FunFam Peroxidase 31 178 - -
Pral5927g00003 387 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Pral5927g00003 387 Gene3D Peroxidase, domain 2 166 308 - -
Pral5927g00003 387 FunFam Peroxidase 166 308 - -
Pral5927g00003 387 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 PANTHER - 11 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5927g00003 387 Gene3D - 31 329 - -
Pral5927g00003 387 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5927g00003 Pral-Chr5927 17330 20494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5927g00003 8 333 Peroxidase AT1G24110 56.575 1.88e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5927g00003 K00430 - gmx:100795676 464.922