Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral5921g00004 | ATGGCCTCCTCCATCCTCGCCTTCCCAAAATCTTTTCTTTCCCCGCCTAAGGCTACCTTCTCTTCCTCTGACCGCAGACTTGCAGGTTTCCGGAAGAACTCGTTGAGGGTTAATGCAGTTGTGAAGAAATGGGAACCCGCAAAGGTGGTTCCGCAGGCTGACAGAGTTCTTATTCGTTTGGATGAGCTTGCGCAAAAAACTACTGGTGGAGTTTTATTGCCAAAGTCTGCTGTTAAGTTTGAGCGATATCTAATGGGAGAAATTATTTCTGCTGGTGCAGAGGTTCAAGAAGTAGAGGCTGGCAAGAAGGTTTTATTCTCAGACATAAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGTAAAGCAAGTGATTTATTGGCTGTGGTTGAGTAG | 408 | 0.4583 | MASSILAFPKSFLSPPKATFSSSDRRLAGFRKNSLRVNAVVKKWEPAKVVPQADRVLIRLDELAQKTTGGVLLPKSAVKFERYLMGEIISAGAEVQEVEAGKKVLFSDINAYEVDLGTDAKHCFCKASDLLAVVE | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral5921g00004 | 135 | Gene3D | GroES chaperonin | 44 | 135 | IPR037124 | GO:0006457 | |
| Pral5921g00004 | 135 | PANTHER | 10 KDA HEAT SHOCK PROTEIN | 47 | 133 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
| Pral5921g00004 | 135 | Pfam | Chaperonin 10 Kd subunit | 48 | 134 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
| Pral5921g00004 | 135 | SUPERFAMILY | GroES-like | 48 | 135 | IPR011032 | - | |
| Pral5921g00004 | 135 | FunFam | 10 kDa chaperonin | 44 | 135 | - | - | |
| Pral5921g00004 | 135 | SMART | Cpn10_2 | 48 | 134 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
| Pral5921g00004 | 135 | CDD | cpn10 | 48 | 134 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral5921g00004 | 26 | 135 | Calmodulin-binding Proteins | AT5G20720 | 29.412 | 2.15e-08 | 49.3 |