Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5920g00002 ATGGGACGTGGATTTTCCAAGCTTCGTTCCTGCTTTGAACCGGTCAACCGGACGGCGACGACAAACCAAACGGACCAGCAGGACGAGATTTCGGCCCCAACTGAGCCTTTGGACGGAACTCTAGGCCACTCCTTCCGCTATGTGAGATCTTCGGCTCGCTTGATTTCACCCGCTCACTCGGATCGCTTCGTCTCTCCTCCTTCTAGCTCCCTCCGCTTCTCTCCCACCGGCGAACCTGTTATCAGAGCCCGAACCGATTGCCCGGAAACTGGGTTCAGGGCCATTTCCGGAGCTTCGGTGAGTGCCAACAATTCGAATCCGAAAACTGTTCTCCAGCTGGAAGATATCTACGACGAAGCCAATGATGATATCGCTCCTGAAGGTCACGTGAGGGGAAGTATTGTGAATGGGTTCGAAAGTACATCTTCGTTTAGTGCTCTTCCGCTTCAGCCGGCGCCGAGAGGGGAGGTTCACTTTCTTTCTGGTCCAATTGAGCGTAGTGCCCTCTCTGGGCCTCTTGAGGCAAACAACGCCACCACAGAAAGTGAAAGTGAGGTCCCCTTTTCGGCTCCTCTGGGCGGCTTTTATATAAAAAAGAAGCGGAAGAGGGCGTTTTCACGGTTGCGTAAGGCATTTCATCGGGCCATTCCGGGGTTGAATTTCGTGGGCAGAAAGGAAGTTCCGTCGAACGAAGATAAGCCGGAGATGAAGAGTGAGAGTCATGTGCAGTGGGCGCTTGGTAAAGCAGGAGAGGATCGGGTACATGTAGTTGTATCAGAAGAACATGGCTGGCTGTTCATCGGGATTTACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTAATGTGCCATCTTTATCGTGCTGTTTATAATGAACTAAAAGGTTTGTTCTGGGAAGTTGAAGAGGCAGAGGAAACTAACCCATCAGCTTCTGAAAATCCATTGCTTGCAATTGGCGCGGAAACTGAAACCTCAATGGGAAAGTCCCGGGCAGAGGTCAAAACGGAGGGTGAAATTTCAGAATGTTTAGAAGATTCGAATCCTCAAATGTTTCAAGCTGAAGGAACTGAAAGCAGACGACGCAGGCTATGGGAATTTCTTGAAGAAGACGATCATGAAGATGGTCTTGATCTTTCAGGCTCAGAAAGATTCGCATTTTCCGTCCATGACGCAATCAACATTAGAAACTCGGGCTCAGAAGTTAGTAGACGGTGGCAATTATCAAAACTGAAGCATGGATTATCAAAACATAAGAGGGTCCATGGTGGTAAGTTGTCACCGTCCGCACAACATGCGAAAGAGAAGGTTGACAGAGAAAAAGAGAAGTCTTCTGGTGGAGGAATAAGGAAGCGGAAGGTGGGACCCGTGGATCATGATTTAGTACTGAGGGCTTTGTGTCGGGCTCTTGAAGCCACAGAAGTTGCTTACTTGGACCTGACGGACAAGCTTCTTGATTCAAACCCAGAACTTGCTTTAATGGGGTCGTGTGTTTTAGTTGTTCTAATGAGGGACGATGATGTCTACGTGATGAACGTGGGAGATAGCCGAGCCATTGTCGCACAATATAAGCCCAGAGAGTTGAAGTCTACAGATGAATTGAGATGTGAGGTAAATAACGAGGAATTCATAGATAGATATGAAAGCGAAATCAAGTTGGAGAATGAGGATTCTGGCCAAGAAATGAGGTTAGTTGCATTACAGCTTTCCACCGACCATAGCACCAGCATTGAAGAGGAAGTCATAAGAATTAAGAACGAACATCCTGATGATAGCCACTGCATTGTCAATAATAGAGTGAAAGGTCGTCTTCAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGATGCAGTGCTGGAAATGTTTCGCAATGATTATATTGGCACTGCTCCCTATATATCCTGCTCTCCTTCACTATACCACCATAGATTAACCCAAAGAGATCAGTTCTTAATCCTCTCATCTGATGGATTATATCAATATCTAACAAATCAAGAAGTGGTTTCTCAAGTTGAGAACTTGATGGAGAAGTTCCCAGATGGAGATCCTGCTCAGCATTTGATAGAACAGCTACTCATCCGAGCAGCCAAGAAAGCTGGAATGGATGTGCATGAGTTGCTGGATATTCCACAGGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAGGGCAGAATCTGGAAATCATCAGGCAGCTATATCTGA 2241 0.4703 MGRGFSKLRSCFEPVNRTATTNQTDQQDEISAPTEPLDGTLGHSFRYVRSSARLISPAHSDRFVSPPSSSLRFSPTGEPVIRARTDCPETGFRAISGASVSANNSNPKTVLQLEDIYDEANDDIAPEGHVRGSIVNGFESTSSFSALPLQPAPRGEVHFLSGPIERSALSGPLEANNATTESESEVPFSAPLGGFYIKKKRKRAFSRLRKAFHRAIPGLNFVGRKEVPSNEDKPEMKSESHVQWALGKAGEDRVHVVVSEEHGWLFIGIYDGFNGPDAPEFLMCHLYRAVYNELKGLFWEVEEAEETNPSASENPLLAIGAETETSMGKSRAEVKTEGEISECLEDSNPQMFQAEGTESRRRRLWEFLEEDDHEDGLDLSGSERFAFSVHDAINIRNSGSEVSRRWQLSKLKHGLSKHKRVHGGKLSPSAQHAKEKVDREKEKSSGGGIRKRKVGPVDHDLVLRALCRALEATEVAYLDLTDKLLDSNPELALMGSCVLVVLMRDDDVYVMNVGDSRAIVAQYKPRELKSTDELRCEVNNEEFIDRYESEIKLENEDSGQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNNRVKGRLQVTRAFGAGFLKQPKWNDAVLEMFRNDYIGTAPYISCSPSLYHHRLTQRDQFLILSSDGLYQYLTNQEVVSQVENLMEKFPDGDPAQHLIEQLLIRAAKKAGMDVHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGSYI 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5920g00002 746 PANTHER PROTEIN PHOSPHATASE 2C 231 733 IPR015655 GO:0004722|GO:0006470
Pral5920g00002 746 MobiDBLite consensus disorder prediction 13 33 - -
Pral5920g00002 746 SUPERFAMILY PP2C-like 247 735 IPR036457 -
Pral5920g00002 746 Gene3D - 222 741 IPR036457 -
Pral5920g00002 746 ProSiteProfiles PPM-type phosphatase domain profile. 236 734 IPR001932 -
Pral5920g00002 746 MobiDBLite consensus disorder prediction 417 452 - -
Pral5920g00002 746 Pfam Protein phosphatase 2C 409 701 IPR001932 -
Pral5920g00002 746 CDD PP2Cc 458 734 IPR001932 -
Pral5920g00002 746 FunFam Protein phosphatase 2C 29 417 741 - -
Pral5920g00002 746 MobiDBLite consensus disorder prediction 429 452 - -
Pral5920g00002 746 MobiDBLite consensus disorder prediction 1 41 - -
Pral5920g00002 746 SMART PP2C_4 235 732 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5920g00002 Pral-Chr5920 18997 22115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5920g00002 1 746 PP2C-type Phosphatase Gene Family AT2G35350 55.723 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5920g00002 - - pcin:129312184 1170.22