Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5913g00001 ATGAGGCTCCTCCTCTTGCTCCTCCTCCTTCTCCTTCTTCACCACTCCTCTTCTGCCCCCATGTCTGAGTACCGTGCCCTTCTTTCCCTCAAAGCAGCCATTACCGACGACCCCCAATCTTCTCTCTCCTCTTGGAACACCTCCACCAGTCACTGCACCTGGTCCGGTGTCACCTGCGACTCCCGACGCCATGTCGTTTCCTACTTAACCGGCCTTGGCCTCTCCGGCTCACTCTCCAACGATATTGCTCACCTACCATTTCTCGCTAATCTCTCCGTTGCTGATAATGAGCTCTCAGGACCCATCCCGCCGGGGATTTCTGTAGTCACCGGCCTCCGATTCCTCAACCTTTCTAACAATGTGTTCAACGGAACTTTCCCTGCTCAGCTTTCCGAGCTAAAGAATCTTCAGGTCCTCGACCTTTATAACAACAACATGACCGGAGACCTCCCGCTCGTTGTGACCCAGATGCCGAATCTCCGGCATTTGCATCTCGGAGGGAATTTCTTCGGGGGTCAGATCCCCCCGGAGTATGGGCGGTGGGAACACTTGGAATATTTGGCTGTTTCTGGTAATGAGTTGGACGGCAAAATACCGCCGGAGATCGGAAACTTGACGAAGCTCCGGGAGCTTTACATTGGATATTACAACACATACGACGGCGGTTTACCACCGGAGATTGGGAACTTGTCGGAATTAGTCAGGTTCGACGCGGCGAACTGTGGATTAACAGGGGAGATTCCCCCGGAAATCGAGAAACTTCAGAAACTCGATACACTGTTTCTTCAAGTGAATGCGCTTTCGGGGCCTCTGACACCTGAGCTTGGGAACTTGAAGAGTCTAAAATCAATGGATTTATCCAACAATATGCTTGCGGGTGAGATTCCGGAGAGTTTTGCTGAGCTTAAGAACCTGACTCTTTTGAACCTCTTCAGAAACAAGCTTCATGGAGCCATTCCTGAGTTCATTGGTGAACTACCTTCCCTGGAGGTATTACAGCTTTGGGAGAATAACTTCACTGAGAGCATTCCACAGGGATTGGGGCAGAATGGGAGGCTTGTTGTTGTTGATCTCTCGTCTAACAAACTAACCGGTTCTTTGCCTCCTGATATGTGCAATGGGAATGGTCTTCAGACTCTAATAACTCTTGGAAATTTCTTGTTTGGTCCTATCCCTGAATCACTCGGCAAGTGCGAGTCATTAACACGAATTCGTATGGGAGAGAACTTTCTGAATGGTTCGATTCCTAAAGGCCTCTTTGGGCTTCCGAAACTTACACAGGTTGAACTTCAGGACAATTTTCTCTCTGGGCAATTCCCTGAGGGGGATTCCTTTGCTGTTAATCTTGGTCAGATTAGTCTATCCAACAACAAGCTTTCTGGGCCGTTGCCACCTTCTATTGGTAACTTTTCCGGCATGCAAAAGCTTCTTCTGGACGGTAACAAATTCTCAGGTCAAATACCTCCTCAGATTGGGAGATTACAGCAGCTTTCGAAGGTAGACTTTAGCCACAACAAGTTCTCGGGCCCTATCGCCCCAGAAATCAGTAAATGCAAGTTACTGACATTCGTTGATCTTAGTCGTAACGAGCTTTCTGGTGAGATTCCAAACGAATTAACCGGTATGCGGATTCTCAATTACTTGAATCTCTCTAGAAATCACCTTGTTGGCAGTATTCCCTCATCAATATCAAGCATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTCTCCGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTACACATCTTTCCTTGGCAACCCTGAACTCTGTGGTCCTTATTTGGGTCCTTGCAAGGATGGTGTTGCTAATGGTGCTCACCCACCTCATGTTAAAGGTCCATTGTCATCTTCCTTGAAACTTCTCTTGGTTCTTGGGTTGCTATTGTGCTCGATTGCATTTGCAGTTGCAGCAATAATTAAAGCACGATCACTGAAGAAGGCAAGTGAAGCTCGTGCATGGAAGCTAACAGCATTCCAGCGCTTGGACTTCACTGCGGACGATGTTTTGGACTGCTTGAAGGAGGACAATATAATAGGTAAAGGAGGTGCGGGAATTGTGTACAAGGGTGCCATGCCTAATGGTGATCAAGTTGCAGTGAAAAGGTTGCCGGCCATGAGCAGAGGTTCTTCCCATGATCACGGTTTCAATGCAGAGATCCAGACATTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACTAATCTGTTGGTGTATGAATACATGCCCAATGGAAGCCTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATCTGCACTGGGACACAAGGTATAAAATCGCTGTGGAGGCTGCAAAGGGGCTGTGTTATCTACACCACGACTGTTCCCCTCTTATTGTTCATCGAGATGTGAAGTCGAACAATATCCTTCTTGACTCCAACCTCGAAGCTCATGTGGCTGATTTTGGACTTGCCAAGTTTCTGCAAGATTCTGGAACGTCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACACTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGAGTTGTTCTCCTAGAGCTTGTAACAGGGAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTGAGGAAGATGACTGACTCAAACAAGGAAGGAGTTCTGAAAGTTCTTGACCCAAGACTTCCCTCAGTTCCTCTTCACGAGGTGATGCATGTGTTCTATGTGGCAATGTTGTGTGTTGAAGAACAAGCGGTAGAGAGACCAACTATGCGTGAAGTTGTCCAAATTCTAACAGAGCTTCCCAAGCCACCTGCTTCTAAACAGGGAGACTTGGCAATCATAGAGTCATCTCTGTCTTCATCAAACCCTCTAGATTCTCCAACAGAACTCAAAGATCATCAGCATCCTCCTCAATCGCCACCACCAGATCTTCTTAGCATTTGA 3024 0.4699 MRLLLLLLLLLLLHHSSSAPMSEYRALLSLKAAITDDPQSSLSSWNTSTSHCTWSGVTCDSRRHVVSLXLTGLGLSGSLSNDIAHLPFLANLSVADNELSGPIPPGISVVTGLRFLNLSNNVFNGTFPAQLSELKNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFGGQIPPEYGRWEHLEYLAVSGNELDGKIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRFDAANCGLTGEIPPEIEKLQKLDTLFLQVNALSGPLTPELGNLKSLKSMDLSNNMLAGEIPESFAELKNLTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTESIPQGLGQNGRLVVVDLSSNKLTGSLPPDMCNGNGLQTLITLGNFLFGPIPESLGKCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNFLSGQFPEGDSFAVNLGQISLSNNKLSGPLPPSIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGPIAPEISKCKLLTFVDLSRNELSGEIPNELTGMRILNYLNLSRNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGAHPPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNLEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPASKQGDLAIIESSLSSSNPLDSPKXELKDHQHPPQSPPPDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5913g00001 1009 Gene3D Ribonuclease Inhibitor 176 232 IPR032675 -
Pral5913g00001 1009 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5913g00001 1009 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 222 960 - -
Pral5913g00001 1009 Pfam Leucine Rich repeats (2 copies) 135 169 IPR025875 -
Pral5913g00001 1009 SUPERFAMILY Protein kinase-like (PK-like) 683 958 IPR011009 -
Pral5913g00001 1009 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Pral5913g00001 1009 SMART LRR_typ_2 352 375 IPR003591 -
Pral5913g00001 1009 SMART LRR_typ_2 279 302 IPR003591 -
Pral5913g00001 1009 SMART LRR_typ_2 134 157 IPR003591 -
Pral5913g00001 1009 SMART LRR_typ_2 567 590 IPR003591 -
Pral5913g00001 1009 SMART LRR_typ_2 158 182 IPR003591 -
Pral5913g00001 1009 SMART LRR_typ_2 327 351 IPR003591 -
Pral5913g00001 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 17 79 - -
Pral5913g00001 1009 SUPERFAMILY RNI-like 67 389 - -
Pral5913g00001 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Pral5913g00001 1009 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5913g00001 1009 MobiDBLite consensus disorder prediction 966 1009 - -
Pral5913g00001 1009 SUPERFAMILY L domain-like 351 612 - -
Pral5913g00001 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 323 - -
Pral5913g00001 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 974 - -
Pral5913g00001 1009 MobiDBLite consensus disorder prediction 973 987 - -
Pral5913g00001 1009 Gene3D Ribonuclease Inhibitor 351 616 IPR032675 -
Pral5913g00001 1009 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Pral5913g00001 1009 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Pral5913g00001 1009 Gene3D Ribonuclease Inhibitor 238 348 IPR032675 -
Pral5913g00001 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 616 - -
Pral5913g00001 1009 Gene3D Transferase(Phosphotransferase) domain 1 765 974 - -
Pral5913g00001 1009 Gene3D Phosphorylase Kinase; domain 1 654 764 - -
Pral5913g00001 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5913g00001 Pral-Chr5913 11884 15422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5913g00001 16 1009 Receptor kinase-like Gene Family AT5G65700 81.982 0.0 1629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5913g00001 PK_Tyr_Ser-Thr 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5913g00001 - - qsa:O6P43_033961 1729.92