Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5902g00010 ATGGCTTCCCTTCTTCATCCGCCTGTAGCACCAGATAATAACTCTAAAGTTGTAGAACTACAGACCAGTCTAGACTTTATTACTGCATTTGAGAACACGGCGATCCAGCCAACAGATAGAAGCAAAGGTACTCAGAGAGAGGATGAGGCGGTTTTCATGACATGGGAAGACTTGTGGGTGACTGTTGGAAGTGGAAAGAATAGAAAACCAATATTGCAGGGTCTGACTGGTTATGCCAAGCCAGGACAGCTTTTGGCCATAATGGGTCCTTCAGGATGCGGCAAAACCACACTCCTAGATGCTTTAGCAGGAAGATTAGATTCAAACATGCAGCAAACAGGGAAGATTCTAATCAATGGAAACAGACAAGCACTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCTATGCTGTCAACTTTAACGGCCGGGGAAGCTTTATATTACTCATGCCAGCTCCAACTTCCAGATTCTATGTCCATTGAAGAGAAGAAGGAGAGAGCGGACTCTACACTCAGAGAAATGGGTCTACAAGATGCCATCAACACCAGGATTGGAGGGTGGACTACAAGAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGATTATAACACGCCCGAAACTTCTCTTCCTTGACGAACCAACTAGTGGTCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTATAAACATAAGGGATGGCATTGAAAGAACAATTGTAGCATCTATCCATCAGCCTAGTAGTGAAGTTTTTCAACTTTTCCATAATCTCTGCCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCATCTGAGGCAAATGAGTTCTTCGCTTCAAATGGTTTTCCTTGCCCAAGTCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAGCAGGATCCTGAAGAAGGCTTTGGTAAAAGAGTAACAACAGAAGAAGCGATTAATACCCTTGTGGAGTCCTACAAGTCATTTGAAATTCGCCAACAAATTCTGAAGGAAGTGGAAGAAATAAGCGAAAATGATTCTGATGCATTTGGGAAAAAGAGAACCCATGCTGCACTCGTTACTCAGTGCCTTGTCCTTATAAGAAGATCTTCCCTGCATATGTACCGTGACATAAGCAATTACTGGTTACGTCTTGCTGTGTATGTTGCAATAGCTACTAGTCTGGGTACCATATTCTATAACGTGGGCTTAAGTATTGAATCTATTCAGGCTAGAGGATCGCTGCTCACATTTTTTACTTCAGTCCTCACTTTCATAACCCTCATTGGCGGGTTGCCTCCACTTTTGGAAGAAATGAAGGTATCCAAACGAGAGAGGTTGAATGGACATTATGGAGTCACTGCTTTTCTCATTGGAAACATATTATCTGCTATACCTTACATGCTACTATGA 1452 0.4208 MASLLHPPVAPDNNSKVVELQTSLDFITAFENTAIQPTDRSKGTQREDEAVFMTWEDLWVTVGSGKNRKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLDSNMQQTGKILINGNRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSIEEKKERADSTLREMGLQDAINTRIGGWTTRGLSSGQKRRLSICIEIITRPKLLFLDEPTSGLDSAASYYVMSRIASINIRDGIERTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEFFASNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGKRVTTEEAINTLVESYKSFEIRQQILKEVEEISENDSDAFGKKRTHAALVTQCLVLIRRSSLHMYRDISNYWLRLAVYVAIATSLGTIFYNVGLSIESIQARGSLLTFFTSVLTFITLIGGLPPLLEEMKVSKRERLNGHYGVTAFLIGNILSAIPYMLL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5902g00010 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 289 IPR027417 -
Pral5902g00010 483 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 42 483 - -
Pral5902g00010 483 Gene3D - 53 308 IPR027417 -
Pral5902g00010 483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
Pral5902g00010 483 SMART AAA_5 81 270 IPR003593 GO:0016887
Pral5902g00010 483 FunFam ABC transporter G family member 11 51 338 - -
Pral5902g00010 483 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Pral5902g00010 483 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Pral5902g00010 483 Pfam ABC-2 type transporter 255 361 IPR043926 GO:0140359
Pral5902g00010 483 Pfam ABC-2 type transporter 374 483 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5902g00010 Pral-Chr5902 148646 159686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5902g00010 82 227 Calmodulin-binding Proteins AT2G36910 30.625 6.33e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5902g00010 K05681 - gmx:100790102 706.057