Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5902g00008 | ATGAGTTGGTTTGTGAAAAGTGATGGCCATGGATCATCAAGACGAGGGCAAATAGTGAGCTTGGAGATGGAGGAGCAGAGAGGAGGAGGAGGAGAACAAGGTATTTTTCTGACATGGGAGGATCTGAAGGTGACAGTGACGACCAATGGGAAAGACAAGTCTAGGCCAATCATTGAAGGTCTCACTGGTTATGCCAAGCCAGGACAGCTCTTAGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCCACCCTCCTTGACGCCTTAGCAGGTAGGTTGTGTACAAGGGCACAGCAAACAGGAGATATCCTTATCAATGGCCGCAAACAAGGACTGGCTTATGGAACATCAGCATATCTGACGCAAGATGATGCAATATTCACAACCTTAACGGTGGGAGAAGCAGTGCACTACTCAGCTCAATTGCAACTTCCTGATTCAATGACCAAGTCGGAGAAGAGGGAGAGAGCAGACTTCACAATCAGAGAAATGGGTTTACAAGACGCCATTAACACAAGGATTGGAGGTTGTGGAGGTTCTAAAGGAATCAGTGGAGGCCAAAAGAGAAGGGTTAGCATCTGTATTGAGATTCTCACACGGCCTAGCCTTCTGTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCAAGCTTGAATCAGAAAGATGGAATTCAAAGGACTATTATTGCAGCAATTCATCAGCCTAGCAGTGAGGTTTTTGAGCTTTTTCATAACCTTTGCCTTCTGTCTTCTGGTCAAGCTGTGTACTTTGGCCCTGCTTCTGCTGCAAAGGAGTTTTTTGCATCAAATGGTTTTCCTTGCCCTACTCTCAAGAGCCCCTCTGATCATTTTGTAAAGACTATCAACAATGATTTTGATAAGGAGGACCCAGAGCAAGGATTATCCGAAGGACTAACCACAGAAGAACCAGTTCATATTCTTGTGGAATCATACAAGTCATCTGCAATCAGTCACCAAGTTCAAGCAGAAGTAGTTACAACAAGAACAAGGAATTCAAGTGCAGTGCAGATGAAAAGCCATGCCTCCTTCTTCAAGCAGTGCATCATTCTTACAAGAAGATCATTTTGGAATATGCATCGCGATTTAGGCTACTATTGGTTGCGTCTATTTATCTATGGTGGATTGGCTATAACTCTAGGCACTATCTTCTACAATGTTGGCTCAAGCAAAACAACTCAGGTAAGAGGCTCACTGCTCATGTTTGTGGCCACATTTCTGAGTTTCATAACCATTGCTGGGTTCGCTTCCCTTGTGGAGGACATGAAGGTGTTTCAAAGAGAAAGACTAAATGGGCATTATGGTGTTGCTGCATACACAATTGGACACACATTATCTTGCATTCCATTCTTGCTACTAATGTCACTGATTCCAGGAGCAATAATTTATTACCTAACCGGACTTCATAGTGGCTATCAGCATTTTCTCTACTTTGCTTCTGTGCTTTTCATCTCAGTAATGTTGGTTGAGAGCTGCATGATGATTGTTGCAAGCATGCTTCCAAATTTCTTGATGGGGATGATCACCGGTGCTGGAATTCTGGGATTAATGATGTTAACCGGTGGATTCTATCGCCTACCTGCGGAACTTCCTAAATTCTTATGGAGATATCCTTTTTACTACATTTCAATTCACAGGTATGCATGCCATGGATTGTTCAAGAATGAGTTTGAAGGTCTGACATTTACTATCAGTCAAGAGGGGAGGCCTAGGATCTTTAGTGGGGAAGAAATGCTGAGAAATTCATGGCAGATCGACGTGGAAAACTCGAAGTGGATCGATCTTTTGATTCTGGTAGGAATGGCAGTTCTGTACAGAAGTCTGTTCATGGTTATAGTCAAGATCCTTGAGAAGGTGAAGCCTATAGTTGCATCCTTCAACTTCAAGTTTGGGAATTATTGGATTCACAAGGCTGTTCTTGTAGAAGGCCAATCAAGAACACAGTCTCATTCAAGATTTGTAGCAGACCATCATGGAGTGAACTTGCTTTATCATTGTGCAACTGAGCCTGAAGCTCAGATGAAAACGATTGAGGAGGGTTTTGTTGTTTGCAAGCCATTTCTGTTGAAATGGATTTCATCCAGGATCTTAGTTTTAGTAACCATAATTTTGCAACCAAAAGATGATACTCCTGTAGCACCAGATAATAACTCTAAAGTTGTAGAACTACAAACCAGTCTAGACTTTATTACTACATTTGAGAACACGGGGATCCAGCCAACAGATAGAAGCAAAGGCACTCAGAGGGAGGATGAGACGGTTTTCATGACATGGGAAGATTTGTGGGTGACTGTTGGAAGCGGAAAGAATAAAAAACCAATATTGCAGGGTCTGACTGGGTATGCCAAGCCAGGACAGCTTTTGGCCATAATGGGTCCTTCAGGATGCGGGAAAACCACACTCCTTGATGCTTTGGCAGGAAGATTAGATTCAAACATGCAGCAAACAGGGAAGATTCTAATCAATGGAAACAGACAGGCACTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCTATGCTGTCAACTTTAACGGCCGGGGAAGCTTTATATTACTCATGCCAGCTCCAACTTCCAGATTCTATGTCCATTGAAGAGAAGAAGGAGAGAGCGGACTCTACACTCAGAGAAATGGGTCTACAAGATGCCATCAACACCAGGATTGGAGGGTGGACTTCAAGAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGACTATAACACGCCCGAAACTTCTCTTCCTTGATGAACCAACTAGTGGTCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAACATAAGGGATGGCATTGAAAGAACAATTGTAGCATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCACAATCTCTGCCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCATCTGAGGCAAATGAGTTCTTCGCTTCAAATGGTTTTCCTTGCCCAAGCCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAGCAGGATCCTGAAGAAGGCTTTGGTAAAAGAGTAACCACAGAAGAAGCGATTAATATCCTTGTGGAGTCCTACAAGTCATTTGAAATTCGCCAACAAATTCTGAAGGAAGTGGGAGAAATAAGCGAAAGTGATTCTGATGCATTTGGGAAAAAGAGAACCCATGCTGCACTCGTTACTCAGTGCCTTGTTCTTATAAGAAGATCTTCCCTGCATATGTATCGTGACATAAGCAATTACTGGTTACGTCTTGCTGTGTATGTTGCAATAGCTATAAGTCTGGGTACCATATTCTATAACGTGGGCTCAAGTATTGAATCTATTCAGGCTAGAGGATCGCTGCTCACATTTTTTACTTCAGTCCTTACTTTCATAACCCTTATCGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGGTATTTAAACGAGAGAGGTTGAATGGACACTATGGTGTTACTGCTTTTCTGATTGGCAACACATTATCTGCTATTCCATACATGCTACTGATATCTCTGATACCTGGAGGAATAGTTTATTGCCTTTCTGGCCTGCACAAAGGACTTGAGCAATTTTTGTACCTGACGTCTGTGTTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTCTTCCCTAATTTCATAATGGGGATGATCATTGTTGGTGGAATTCAAGGAGTCATGATATTACTTGGTGGTTTCTATAGATTGCCAAACGATCTCCCCAAACCATTTTGGAGATACCCTTTATATTATGCTTCATTCCACAAGTATGCCTTCCAAGGATTGTTCAAGAATGAGTTTGAAGGTTTAACATTTCCCACTGATCATGATGGAGGCAGCAAAACCACTAGTGGCAGAGAAATTCTGACAAACACGTGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTGGCAATCCTGCTTGGAATGATTGTTCTATATCGGCTTCTGTTCTTGGCCATCACTAAGACCAAGGAGAATGCAAAGCCTATGGTTGCAGCTATCTGTTGTTCCCCAAGCAAAATCATGGTGACCCGAAGAAATTAG | 4164 | 0.4251 | MSWFVKSDGHGSSRRGQIVSLEMEEQRGGGGEQGIFLTWEDLKVTVTTNGKDKSRPIIEGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLCTRAQQTGDILINGRKQGLAYGTSAYLTQDDAIFTTLTVGEAVHYSAQLQLPDSMTKSEKRERADFTIREMGLQDAINTRIGGCGGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIQRTIIAAIHQPSSEVFELFHNLCLLSSGQAVYFGPASAAKEFFASNGFPCPTLKSPSDHFVKTINNDFDKEDPEQGLSEGLTTEEPVHILVESYKSSAISHQVQAEVVTTRTRNSSAVQMKSHASFFKQCIILTRRSFWNMHRDLGYYWLRLFIYGGLAITLGTIFYNVGSSKTTQVRGSLLMFVATFLSFITIAGFASLVEDMKVFQRERLNGHYGVAAYTIGHTLSCIPFLLLMSLIPGAIIYYLTGLHSGYQHFLYFASVLFISVMLVESCMMIVASMLPNFLMGMITGAGILGLMMLTGGFYRLPAELPKFLWRYPFYYISIHRYACHGLFKNEFEGLTFTISQEGRPRIFSGEEMLRNSWQIDVENSKWIDLLILVGMAVLYRSLFMVIVKILEKVKPIVASFNFKFGNYWIHKAVLVEGQSRTQSHSRFVADHHGVNLLYHCATEPEAQMKTIEEGFVVCKPFLLKWISSRILVLVTIILQPKDDTPVAPDNNSKVVELQTSLDFITTFENTGIQPTDRSKGTQREDETVFMTWEDLWVTVGSGKNKKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLDSNMQQTGKILINGNRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSIEEKKERADSTLREMGLQDAINTRIGGWTSRGLSSGQKRRLSICIETITRPKLLFLDEPTSGLDSAASYYVMSRIASLNIRDGIERTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEFFASNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGKRVTTEEAINILVESYKSFEIRQQILKEVGEISESDSDAFGKKRTHAALVTQCLVLIRRSSLHMYRDISNYWLRLAVYVAIAISLGTIFYNVGSSIESIQARGSLLTFFTSVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTLSAIPYMLLISLIPGGIVYCLSGLHKGLEQFLYLTSVLFATVMSVESLMMVVGSFFPNFIMGMIIVGGIQGVMILLGGFYRLPNDLPKPFWRYPLYYASFHKYAFQGLFKNEFEGLTFPTDHDGGSKTTSGREILTNTWQVEMGYSKWVDLAILLGMIVLYRLLFLAITKTKENAKPMVAAICCSPSKIMVTRRN | 1387 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5902g00008 | 1387 | Pfam | ABC transporter | 62 | 210 | IPR003439 | GO:0005524 | |
Pral5902g00008 | 1387 | Gene3D | - | 771 | 1023 | IPR027417 | - | |
Pral5902g00008 | 1387 | Gene3D | - | 37 | 279 | IPR027417 | - | |
Pral5902g00008 | 1387 | ProSitePatterns | ABC transporters family signature. | 182 | 196 | IPR017871 | GO:0005524|GO:0016887 | |
Pral5902g00008 | 1387 | FunFam | ABC transporter G family member 11 | 35 | 326 | - | - | |
Pral5902g00008 | 1387 | Pfam | ABC-2 type transporter | 242 | 346 | IPR043926 | GO:0140359 | |
Pral5902g00008 | 1387 | Pfam | ABC-2 type transporter | 973 | 1079 | IPR043926 | GO:0140359 | |
Pral5902g00008 | 1387 | SMART | AAA_5 | 799 | 988 | IPR003593 | GO:0016887 | |
Pral5902g00008 | 1387 | SMART | AAA_5 | 67 | 257 | IPR003593 | GO:0016887 | |
Pral5902g00008 | 1387 | ProSitePatterns | ABC transporters family signature. | 913 | 927 | IPR017871 | GO:0005524|GO:0016887 | |
Pral5902g00008 | 1387 | Pfam | ABC-2 type transporter | 362 | 572 | IPR013525 | GO:0016020|GO:0140359 | |
Pral5902g00008 | 1387 | Pfam | ABC-2 type transporter | 1092 | 1305 | IPR013525 | GO:0016020|GO:0140359 | |
Pral5902g00008 | 1387 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 771 | 1016 | IPR003439 | GO:0005524 | |
Pral5902g00008 | 1387 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 37 | 285 | IPR003439 | GO:0005524 | |
Pral5902g00008 | 1387 | FunFam | ABC transporter G family member 11 | 769 | 1056 | - | - | |
Pral5902g00008 | 1387 | Pfam | ABC transporter | 791 | 941 | IPR003439 | GO:0005524 | |
Pral5902g00008 | 1387 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 37 | 276 | IPR027417 | - | |
Pral5902g00008 | 1387 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 772 | 1007 | IPR027417 | - | |
Pral5902g00008 | 1387 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 11 | 30 | 642 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5902g00008 | Pral-Chr5902 | 93978 | 112224 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5902g00008 | 800 | 951 | Calmodulin-binding Proteins | AT2G36910 | 30.120 | 2.90e-09 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5902g00008 | K05681 | - | gmx:100790102 | 951.429 |