Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5902g00008 ATGAGTTGGTTTGTGAAAAGTGATGGCCATGGATCATCAAGACGAGGGCAAATAGTGAGCTTGGAGATGGAGGAGCAGAGAGGAGGAGGAGGAGAACAAGGTATTTTTCTGACATGGGAGGATCTGAAGGTGACAGTGACGACCAATGGGAAAGACAAGTCTAGGCCAATCATTGAAGGTCTCACTGGTTATGCCAAGCCAGGACAGCTCTTAGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCCACCCTCCTTGACGCCTTAGCAGGTAGGTTGTGTACAAGGGCACAGCAAACAGGAGATATCCTTATCAATGGCCGCAAACAAGGACTGGCTTATGGAACATCAGCATATCTGACGCAAGATGATGCAATATTCACAACCTTAACGGTGGGAGAAGCAGTGCACTACTCAGCTCAATTGCAACTTCCTGATTCAATGACCAAGTCGGAGAAGAGGGAGAGAGCAGACTTCACAATCAGAGAAATGGGTTTACAAGACGCCATTAACACAAGGATTGGAGGTTGTGGAGGTTCTAAAGGAATCAGTGGAGGCCAAAAGAGAAGGGTTAGCATCTGTATTGAGATTCTCACACGGCCTAGCCTTCTGTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCAAGCTTGAATCAGAAAGATGGAATTCAAAGGACTATTATTGCAGCAATTCATCAGCCTAGCAGTGAGGTTTTTGAGCTTTTTCATAACCTTTGCCTTCTGTCTTCTGGTCAAGCTGTGTACTTTGGCCCTGCTTCTGCTGCAAAGGAGTTTTTTGCATCAAATGGTTTTCCTTGCCCTACTCTCAAGAGCCCCTCTGATCATTTTGTAAAGACTATCAACAATGATTTTGATAAGGAGGACCCAGAGCAAGGATTATCCGAAGGACTAACCACAGAAGAACCAGTTCATATTCTTGTGGAATCATACAAGTCATCTGCAATCAGTCACCAAGTTCAAGCAGAAGTAGTTACAACAAGAACAAGGAATTCAAGTGCAGTGCAGATGAAAAGCCATGCCTCCTTCTTCAAGCAGTGCATCATTCTTACAAGAAGATCATTTTGGAATATGCATCGCGATTTAGGCTACTATTGGTTGCGTCTATTTATCTATGGTGGATTGGCTATAACTCTAGGCACTATCTTCTACAATGTTGGCTCAAGCAAAACAACTCAGGTAAGAGGCTCACTGCTCATGTTTGTGGCCACATTTCTGAGTTTCATAACCATTGCTGGGTTCGCTTCCCTTGTGGAGGACATGAAGGTGTTTCAAAGAGAAAGACTAAATGGGCATTATGGTGTTGCTGCATACACAATTGGACACACATTATCTTGCATTCCATTCTTGCTACTAATGTCACTGATTCCAGGAGCAATAATTTATTACCTAACCGGACTTCATAGTGGCTATCAGCATTTTCTCTACTTTGCTTCTGTGCTTTTCATCTCAGTAATGTTGGTTGAGAGCTGCATGATGATTGTTGCAAGCATGCTTCCAAATTTCTTGATGGGGATGATCACCGGTGCTGGAATTCTGGGATTAATGATGTTAACCGGTGGATTCTATCGCCTACCTGCGGAACTTCCTAAATTCTTATGGAGATATCCTTTTTACTACATTTCAATTCACAGGTATGCATGCCATGGATTGTTCAAGAATGAGTTTGAAGGTCTGACATTTACTATCAGTCAAGAGGGGAGGCCTAGGATCTTTAGTGGGGAAGAAATGCTGAGAAATTCATGGCAGATCGACGTGGAAAACTCGAAGTGGATCGATCTTTTGATTCTGGTAGGAATGGCAGTTCTGTACAGAAGTCTGTTCATGGTTATAGTCAAGATCCTTGAGAAGGTGAAGCCTATAGTTGCATCCTTCAACTTCAAGTTTGGGAATTATTGGATTCACAAGGCTGTTCTTGTAGAAGGCCAATCAAGAACACAGTCTCATTCAAGATTTGTAGCAGACCATCATGGAGTGAACTTGCTTTATCATTGTGCAACTGAGCCTGAAGCTCAGATGAAAACGATTGAGGAGGGTTTTGTTGTTTGCAAGCCATTTCTGTTGAAATGGATTTCATCCAGGATCTTAGTTTTAGTAACCATAATTTTGCAACCAAAAGATGATACTCCTGTAGCACCAGATAATAACTCTAAAGTTGTAGAACTACAAACCAGTCTAGACTTTATTACTACATTTGAGAACACGGGGATCCAGCCAACAGATAGAAGCAAAGGCACTCAGAGGGAGGATGAGACGGTTTTCATGACATGGGAAGATTTGTGGGTGACTGTTGGAAGCGGAAAGAATAAAAAACCAATATTGCAGGGTCTGACTGGGTATGCCAAGCCAGGACAGCTTTTGGCCATAATGGGTCCTTCAGGATGCGGGAAAACCACACTCCTTGATGCTTTGGCAGGAAGATTAGATTCAAACATGCAGCAAACAGGGAAGATTCTAATCAATGGAAACAGACAGGCACTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCTATGCTGTCAACTTTAACGGCCGGGGAAGCTTTATATTACTCATGCCAGCTCCAACTTCCAGATTCTATGTCCATTGAAGAGAAGAAGGAGAGAGCGGACTCTACACTCAGAGAAATGGGTCTACAAGATGCCATCAACACCAGGATTGGAGGGTGGACTTCAAGAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGACTATAACACGCCCGAAACTTCTCTTCCTTGATGAACCAACTAGTGGTCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAACATAAGGGATGGCATTGAAAGAACAATTGTAGCATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCACAATCTCTGCCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCATCTGAGGCAAATGAGTTCTTCGCTTCAAATGGTTTTCCTTGCCCAAGCCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAGCAGGATCCTGAAGAAGGCTTTGGTAAAAGAGTAACCACAGAAGAAGCGATTAATATCCTTGTGGAGTCCTACAAGTCATTTGAAATTCGCCAACAAATTCTGAAGGAAGTGGGAGAAATAAGCGAAAGTGATTCTGATGCATTTGGGAAAAAGAGAACCCATGCTGCACTCGTTACTCAGTGCCTTGTTCTTATAAGAAGATCTTCCCTGCATATGTATCGTGACATAAGCAATTACTGGTTACGTCTTGCTGTGTATGTTGCAATAGCTATAAGTCTGGGTACCATATTCTATAACGTGGGCTCAAGTATTGAATCTATTCAGGCTAGAGGATCGCTGCTCACATTTTTTACTTCAGTCCTTACTTTCATAACCCTTATCGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGGTATTTAAACGAGAGAGGTTGAATGGACACTATGGTGTTACTGCTTTTCTGATTGGCAACACATTATCTGCTATTCCATACATGCTACTGATATCTCTGATACCTGGAGGAATAGTTTATTGCCTTTCTGGCCTGCACAAAGGACTTGAGCAATTTTTGTACCTGACGTCTGTGTTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTCTTCCCTAATTTCATAATGGGGATGATCATTGTTGGTGGAATTCAAGGAGTCATGATATTACTTGGTGGTTTCTATAGATTGCCAAACGATCTCCCCAAACCATTTTGGAGATACCCTTTATATTATGCTTCATTCCACAAGTATGCCTTCCAAGGATTGTTCAAGAATGAGTTTGAAGGTTTAACATTTCCCACTGATCATGATGGAGGCAGCAAAACCACTAGTGGCAGAGAAATTCTGACAAACACGTGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTGGCAATCCTGCTTGGAATGATTGTTCTATATCGGCTTCTGTTCTTGGCCATCACTAAGACCAAGGAGAATGCAAAGCCTATGGTTGCAGCTATCTGTTGTTCCCCAAGCAAAATCATGGTGACCCGAAGAAATTAG 4164 0.4251 MSWFVKSDGHGSSRRGQIVSLEMEEQRGGGGEQGIFLTWEDLKVTVTTNGKDKSRPIIEGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLCTRAQQTGDILINGRKQGLAYGTSAYLTQDDAIFTTLTVGEAVHYSAQLQLPDSMTKSEKRERADFTIREMGLQDAINTRIGGCGGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIQRTIIAAIHQPSSEVFELFHNLCLLSSGQAVYFGPASAAKEFFASNGFPCPTLKSPSDHFVKTINNDFDKEDPEQGLSEGLTTEEPVHILVESYKSSAISHQVQAEVVTTRTRNSSAVQMKSHASFFKQCIILTRRSFWNMHRDLGYYWLRLFIYGGLAITLGTIFYNVGSSKTTQVRGSLLMFVATFLSFITIAGFASLVEDMKVFQRERLNGHYGVAAYTIGHTLSCIPFLLLMSLIPGAIIYYLTGLHSGYQHFLYFASVLFISVMLVESCMMIVASMLPNFLMGMITGAGILGLMMLTGGFYRLPAELPKFLWRYPFYYISIHRYACHGLFKNEFEGLTFTISQEGRPRIFSGEEMLRNSWQIDVENSKWIDLLILVGMAVLYRSLFMVIVKILEKVKPIVASFNFKFGNYWIHKAVLVEGQSRTQSHSRFVADHHGVNLLYHCATEPEAQMKTIEEGFVVCKPFLLKWISSRILVLVTIILQPKDDTPVAPDNNSKVVELQTSLDFITTFENTGIQPTDRSKGTQREDETVFMTWEDLWVTVGSGKNKKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLDSNMQQTGKILINGNRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSIEEKKERADSTLREMGLQDAINTRIGGWTSRGLSSGQKRRLSICIETITRPKLLFLDEPTSGLDSAASYYVMSRIASLNIRDGIERTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEFFASNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGKRVTTEEAINILVESYKSFEIRQQILKEVGEISESDSDAFGKKRTHAALVTQCLVLIRRSSLHMYRDISNYWLRLAVYVAIAISLGTIFYNVGSSIESIQARGSLLTFFTSVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTLSAIPYMLLISLIPGGIVYCLSGLHKGLEQFLYLTSVLFATVMSVESLMMVVGSFFPNFIMGMIIVGGIQGVMILLGGFYRLPNDLPKPFWRYPLYYASFHKYAFQGLFKNEFEGLTFPTDHDGGSKTTSGREILTNTWQVEMGYSKWVDLAILLGMIVLYRLLFLAITKTKENAKPMVAAICCSPSKIMVTRRN 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5902g00008 1387 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Pral5902g00008 1387 Gene3D - 771 1023 IPR027417 -
Pral5902g00008 1387 Gene3D - 37 279 IPR027417 -
Pral5902g00008 1387 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
Pral5902g00008 1387 FunFam ABC transporter G family member 11 35 326 - -
Pral5902g00008 1387 Pfam ABC-2 type transporter 242 346 IPR043926 GO:0140359
Pral5902g00008 1387 Pfam ABC-2 type transporter 973 1079 IPR043926 GO:0140359
Pral5902g00008 1387 SMART AAA_5 799 988 IPR003593 GO:0016887
Pral5902g00008 1387 SMART AAA_5 67 257 IPR003593 GO:0016887
Pral5902g00008 1387 ProSitePatterns ABC transporters family signature. 913 927 IPR017871 GO:0005524|GO:0016887
Pral5902g00008 1387 Pfam ABC-2 type transporter 362 572 IPR013525 GO:0016020|GO:0140359
Pral5902g00008 1387 Pfam ABC-2 type transporter 1092 1305 IPR013525 GO:0016020|GO:0140359
Pral5902g00008 1387 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 771 1016 IPR003439 GO:0005524
Pral5902g00008 1387 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 285 IPR003439 GO:0005524
Pral5902g00008 1387 FunFam ABC transporter G family member 11 769 1056 - -
Pral5902g00008 1387 Pfam ABC transporter 791 941 IPR003439 GO:0005524
Pral5902g00008 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 276 IPR027417 -
Pral5902g00008 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 1007 IPR027417 -
Pral5902g00008 1387 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5902g00008 Pral-Chr5902 93978 112224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5902g00008 800 951 Calmodulin-binding Proteins AT2G36910 30.120 2.90e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5902g00008 K05681 - gmx:100790102 951.429