Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5902g00005 ATGGAAAATGACGACGTCGACATGCAAAGCGCCGAGAACAATGAAGCAGAATTGGATGACATGAAGAAACGTTTGAAGGAGATGGAAGATGAAGCTGCTGCTTTGCGAGAAATGCAGGCAAAGGTGGAGAAGGAGATGGGCTCTGTGCAAGATCCCGCTAATGCTGCTGCAAGTCAGGCCAATAGAGAGGAAGTAGATTCTCGGTCAGTCTTTGTAGGCAATGTAGACTATTCGTGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGAGTCACCATTCGTACTGACAAGTTTGGACAACCCAAGGGTTATGCTTATGTGGAGTTCCTTGAGGCAGAGGCTGTTCAGGAGGCGCTTTTGCTGAATGAATCTGAGCTACATGGGCGTCAGTTGAAGGTGACAGCCAAGAGGACGAACATACCTGGGATGAAGCAGTATCGTCCCCGCCGGTCCAATCCTTATATGGGGTTTCGAGGCAGAACCCCATATGCACCTCCTTTTGCCTATTCTCCATCTCCATATGGATATGGGAAAGTTCCAAGGTTTAGAATGCCAATGCGTTACAGCCCATACTATTGA 597 0.4774 MENDDVDMQSAENNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEAEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGFRGRTPYAPPFAYSPSPYGYGKVPRFRMPMRYSPYY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5902g00005 198 SMART rrm1_1 69 140 IPR000504 GO:0003723
Pral5902g00005 198 MobiDBLite consensus disorder prediction 43 64 - -
Pral5902g00005 198 CDD RRM_II_PABPs 69 140 - -
Pral5902g00005 198 Gene3D - 1 150 IPR012677 -
Pral5902g00005 198 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 144 IPR000504 GO:0003723
Pral5902g00005 198 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 138 IPR000504 GO:0003723
Pral5902g00005 198 SUPERFAMILY RNA-binding domain, RBD 59 166 IPR035979 GO:0003676
Pral5902g00005 198 MobiDBLite consensus disorder prediction 1 25 - -
Pral5902g00005 198 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 9 165 - -
Pral5902g00005 198 Coils Coil 8 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5902g00005 Pral-Chr5902 60285 65462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5902g00005 69 139 Eukaryotic Initiation Factors Gene Family AT2G36660 31.944 4.27e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5902g00005 K14396 - gmx:100784473 336.265