LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5899g00002	ATGTCGCAGAAGAGACGCCCCGAAGATGGCAAGGCTAAATCAGAGAGCAGCAGTCCGGAGGATAAGCGCAGAAAGGTTCCCCCCTTTTCCAGTGTGGTGCGTGAGGTGATGAAATTAAACAATGTCCGAAATTGGCTGGAGCCAACGCTAGAGCCCTTCCTTCGTCGAGTGGTTAAGGAAGAAGTTGAATCAGCCCTAAACAGACATTTAACGAGCATGAAACAGGCATGTGAGGAGGTTCTAACTCCTGAATCCAGGAATTTGCAGCTGCAGTTTGAAAACAATATTTCTCCTCCGATCTTTACGGGGGCTCGAATTGAGGGGGAAGATGGCTCCAATTTAAGGATAAGTTTATTTGATTCGTTGACAGGACAGGTTGTTAGTTCAGGGCCTGAGTCTGCAGCTAAGGTGGAAATTGTAGTACTTGAGGGTGATTTTGAAGACAGAAGTGACATTTGGATGCCTGAAGAGTTTAAGAGCAACATCGTAAAAGAGAGAGATGGAAAAAAGCCTCTTCTTACGGGAGAAGTATTTTTGGATCTTAAAGATGGGATTGGTGCAGTGGGTGAAATTTCATTTACAGATAATTCAAGCTGGACAAGGAGCCGGAAGTTCAAGCTAGGAGCTAGAGTTGTAAATAACTTTGATGGATTTAGAATAAAAGAAGCAAAGACAGACTCATTTATTGTCAGGGATCACCGAGGGGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTCTGGAGATTAGAAAAGATTGGCAAGGACGGAGCTTTCCATAAGCGGCTGAGTCTGGAGAGGATCAATACTGTAGAAGATTTTCTCACACATCTCAACCTAGACCCAGCAAAGCTACGCAGTATACTGGGGACAGGAATGTCTACAAAAATGTGGGAAGCAACAGTGGAGCATGCTCGAACATGTGTGCTCGATACGCGGAGATTTTTGTACTTCCCTTCTCATTCTGAACCAAAAACTGGTGCGGTCTTTAATGCTGTTGGACAAGTGACGGGACTGCTCTCTGAAAGCCAGTATGTCCCTGTAGATAAGCTGTCTGAAACTGAAAAGGCTGATGCTCAAAGCTCAGTAAGTTCAGCAATTCAACAAAAGGAGGAATTTGACTCTTTCAATGATGAAGCCTCTCTAATGGAGGGGTGTACATCCTTAGACAATGTACCTTCCTCCTCGTACTCACCCAGATCAGATGGATTTAGTGCCCACAAGCTTATGTCTTCTCCGAAGACTGATCGATTTGATTACTTCCAAGGGAGCGGCCCTACTCCGGATATTTTGTCATCTGTGTACCCTGTGGGAGCCAGTGGCTTTGATGAATACCTGTTGCCCATCAGCGACAGCATGAATTTTAGATATGACCAAACACTTGGTTTTCCAGTCCAAACCTCTAATCCTTTCATTGGTGAAACAGATACCATGTCTAATGTCTTCGATGACCAGGCTCATCATTTCTTTGATACTGATATTCGCCCTCCACGTATGGATAAGCAAGCAGAAGTAACGAGTGCTGTTTATGGCAAAGCTCAGAAGAGATGGAGAATGCTATTCAATGTCCTAAAATGGCTCCCATTGAGAAAAAAGAAGCCAGGATTGAGAAGCTGA	1626	0.444	MSQKRRPEDGKAKSESSSPEDKRRKVPPFSSVVREVMKLNNVRNWLEPTLEPFLRRVVKEEVESALNRHLTSMKQACEEVLTPESRNLQLQFENNISPPIFTGARIEGEDGSNLRISLFDSLTGQVVSSGPESAAKVEIVVLEGDFEDRSDIWMPEEFKSNIVKERDGKKPLLTGEVFLDLKDGIGAVGEISFTDNSSWTRSRKFKLGARVVNNFDGFRIKEAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSLERINTVEDFLTHLNLDPAKLRSILGTGMSTKMWEATVEHARTCVLDTRRFLYFPSHSEPKTGAVFNAVGQVTGLLSESQYVPVDKLSETEKADAQSSVSSAIQQKEEFDSFNDEASLMEGCTSLDNVPSSSYSPRSDGFSAHKLMSSPKTDRFDYFQGSGPTPDILSSVYPVGASGFDEYLLPISDSMNFRYDQTLGFPVQTSNPFIGETDTMSNVFDDQAHHFFDTDIRPPRMDKQAEVTSAVYGKAQKRWRMLFNVLKWLPLRKKKPGLRS	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5899g00002	541	Pfam	Calmodulin binding protein C-terminal domain	319	372	IPR046829	-
	Pral5899g00002	541	PANTHER	OS02G0177800 PROTEIN	3	510	IPR012416	GO:0005516
	Pral5899g00002	541	Pfam	Calmodulin binding protein-like N-terminal domain	88	233	IPR046831	-
	Pral5899g00002	541	Pfam	Calmodulin binding protein central domain	245	311	IPR046830	-
	Pral5899g00002	541	MobiDBLite	consensus disorder prediction	1	27	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5899g00002	Pral-Chr5899	5696	11058	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5899g00002	1	360	Calmodulin-binding Proteins	AT5G62570	62.327	3.09e-161	462

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5899g00002	-		-	gmx:100793156	701.049