Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5897g00013 ATGTCATCTCTGGGGGGGCAATCTTCAATATATGCTCTCACACTTGACGAGTTCCAACACAAGCTATGCGAAGAGGGCAAGAATTTTGGGTCCATGAACATGGACGAGTTTCTCAGTAGCATCTGGAACGTGGAAGAAAACCAAACCATCGACAACAAGTCTGTTGATAAAGGCACAAGAAAGCAGCCGAGCCTGTCTCGCCAGGGCTCTCTCACCATTCCCGCTCCGCTCTCCGGAAAAACAGTGGACCAAGTTTGGTCTGAGATACACAGCCAGAGTACCAACAACAACAACAATGGCGATGCCAGCAACAATGTTCGGAATTCCAAGTCTACCACACGCCAGCCCACTTACGGGGAGATGACTCTGGAGGATTTCTTGATCAAAGCAGGGGTAATTCGGGAACCATATCCTATGCCTGCTCAGTACGGGCTGTACCCGAATAACAAACCGGCAATGGGGCCGACTTTGATGGGATGCGCCGGAAATGTCGAGAGGGATGCTTCTGGGTATCCTCCTCCCAGGGTTTGCTATAGAGGCGGTGGGTACGTCCCGGCGCCGGTGAGCCCTGTGTCATCATCGGATGGGATGGCAGCGAGGGAGAACACAGGCGGGATGGAGATGGGACTGTTGAGAGGAAGAAAGAGGATAATAAATGGGCCAGTGGAGAAGTTAGTGGAGAGAAGACAGAGAAGGATGATTAAGAACAGAGAGTCAGCAGCGAGGTCCAGGGCCAGAAAACAGGCATACACCGTTGAATTAGAAGCAGAACTGAGCCAATTGAGAAAGGAGAATGCCCAGCTGAAACTGACTCTGGTAATTTTGAAGGATCGTTACAAATGTTCTTCTTTGTTTCTGGTGACTGCAAGCACCAACTGA 879 0.5051 MSSLGGQSSIYALTLDEFQHKLCEEGKNFGSMNMDEFLSSIWNVEENQTIDNKSVDKGTRKQPSLSRQGSLTIPAPLSGKTVDQVWSEIHSQSTNNNNNGDASNNVRNSKSTTRQPTYGEMTLEDFLIKAGVIREPYPMPAQYGLYPNNKPAMGPTLMGCAGNVERDASGYPPPRVCYRGGGYVPAPVSPVSSSDGMAARENTGGMEMGLLRGRKRIINGPVEKLVERRQRRMIKNRESAARSRARKQAYTVELEAELSQLRKENAQLKLTLVILKDRYKCSSLFLVTASTN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5897g00013 292 MobiDBLite consensus disorder prediction 61 77 - -
Pral5897g00013 292 CDD bZIP_plant_BZIP46 228 282 - -
Pral5897g00013 292 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 278 IPR004827 GO:0003700|GO:0006355
Pral5897g00013 292 SMART brlzneu 224 288 IPR004827 GO:0003700|GO:0006355
Pral5897g00013 292 MobiDBLite consensus disorder prediction 52 77 - -
Pral5897g00013 292 MobiDBLite consensus disorder prediction 91 118 - -
Pral5897g00013 292 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 226 274 - -
Pral5897g00013 292 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 270 IPR043452 GO:0003700|GO:0045893
Pral5897g00013 292 Pfam bZIP transcription factor 228 279 IPR004827 GO:0003700|GO:0006355
Pral5897g00013 292 SUPERFAMILY Leucine zipper domain 228 278 IPR046347 GO:0003700|GO:0006355
Pral5897g00013 292 Coils Coil 251 278 - -
Pral5897g00013 292 Gene3D - 226 282 - -
Pral5897g00013 292 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 231 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5897g00013 Pral-Chr5897 65535 67468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5897g00013 1 280 bZIP Transcription Factor Family AT2G36270 46.457 4.44e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5897g00013 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5897g00013 K14432 - qsa:O6P43_005935 301.982