Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5895g00013 ATGAAGGTAATCGCTGCGTACTTGCTCGCCGTGTTGGGTGGCAACGCTAGCCCTTCCGCCGATGATATCAAGCAGATCCTTGGCTCTGTTGGAGCAGAAGCGGATGATGATAGAATTGAGCTTCTCTTGTCTGAATTGAAGGGTAAAGACATAACGGAGGTTATTGCCAGTGGTAGGGAAAAGTTGGCCTCAGTGCCTGGTGGCGGGGGAGCTGCAGTTGCAGTGGCCGCCGCGCCTGGAGCTGGTGGCGCCGCCGCCGCCCCAGCTGCGGCTGAATCAAAGAAAGAGGAAAAGGTGGAGGAGAAAGAAGAATCTGACGAAGATATGGGCTTCAGCCTCTTCGATTAA 348 0.546 MKVIAAYLLAVLGGNASPSADDIKQILGSVGAEADDDRIELLLSELKGKDITEVIASGREKLASVPGGGGAAVAVAAAPGAGGAAAAPAAAESKKEEKVEEKEESDEDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5895g00013 115 CDD Ribosomal_P2 1 64 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral5895g00013 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pral5895g00013 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pral5895g00013 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral5895g00013 115 MobiDBLite consensus disorder prediction 85 115 - -
Pral5895g00013 115 Gene3D - 1 59 IPR038716 -
Pral5895g00013 115 Pfam 60s Acidic ribosomal protein 17 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5895g00013 Pral-Chr5895 77228 78727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5895g00013 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.217 2.55e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5895g00013 K02943 - nnu:104586918 132.494