Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5895g00004 ATGGACTTCCATCTGAAGCAATGGAAAAACCAGCACGAGTCTGAATCAGAAGAACAACATTTTGCAAAGATGCCAAGGCTCATGCTTGAATCCCATCTACACCCGCCCCCACATTCATCCCCCTCTTCGCCTGCTCTCCCACTCTTTGTGCCTGAACTCAACACCAAAGTCAGCTCGCTCTCTGCATTTTCTGATTCCTCGCTAGCCACGCCCAGATTTCCAAGAATGGGAAGTTATTTCAGTGCGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATGTTGGCGGGTGCTGCTGTTCCGCCTGAACTGCTTCTTCCAATTAAGAAGGGCCTTTTTCATTCCGCTCCTTATTTCCTCCATTACCAACCTTCTCTGTTGCAATCGGGATACTGGGGAGGAGCGACCATGGATCCCGAGCCCGGCCGCTGCCGAAGGACGGACGGCAAGAAATGGAGGTGCTCGAGAGACGTGGTTGCCGGCCAGAAGTACTGTGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACACCAACCACTGCGGGAGGCGTTGGCCCTGCCACCGCCGGCAGCGGCGTCGGGTGTCCCTCTGCTACAACTGCCTCTGTGTCTGCCCCGCATATGACACCAGCACCGTTGAGATCCCCTATCGATCTCCTCCAGCTGAAACGATGTTCATCTGGGACCATCAAGAATGAAAAGGAGAGCATATTTGAAAACCGTAGCCGGGATAATGTGGATGGTGAAGGGAGATCAGATGGGCATATTCTGCGACATTTTTTCGATGATTGGCCCCGACCACTTCAGGAACCTGACAATGCCGAAAGTAACGCCACGTCCATCCACTCAGCCACATGCCTCTCTATCTCAATGCCCGGAAATGCTTCGTCGGACGTGTCGCTGAAACTGTCCACAGGCGATGATGCAGAGGATCCGTGTCCCAGAAGTGCGAATGCGGGCCCACAGCACTTGCAGGTCAATTGGGCAGGAGGATGGGCCTCTTCGGCTAATCATGTGGCTTCAATGGGAGGACCACTAGCAGAGGCGCTCAGATCATCCACCACAACCTCTTCGCCTACAAGTGTCTTGCACCAGTTGCCTCGTAGCTCTGCATCTGAAACTAGCTTCATTAGCACTTAG 1173 0.5388 MDFHLKQWKNQHESESEEQHFAKMPRLMLESHLHPPPHSSPSSPALPLFVPELNTKVSSLSAFSDSSLATPRFPRMGSYFSAAQWQELELQALIFRYMLAGAAVPPELLLPIKKGLFHSAPYFLHYQPSLLQSGYWGGATMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVEVPTPTTAGGVGPATAGSGVGCPSATTASVSAPHMTPAPLRSPIDLLQLKRCSSGTIKNEKESIFENRSRDNVDGEGRSDGHILRHFFDDWPRPLQEPDNAESNATSIHSATCLSISMPGNASSDVSLKLSTGDDAEDPCPRSANAGPQHLQVNWAGGWASSANHVASMGGPLAEALRSSTTTSSPTSVLHQLPRSSASETSFIST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5895g00004 390 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral5895g00004 390 MobiDBLite consensus disorder prediction 1 20 - -
Pral5895g00004 390 Pfam WRC 143 185 IPR014977 -
Pral5895g00004 390 PANTHER GROWTH-REGULATING FACTOR 5 38 309 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral5895g00004 390 MobiDBLite consensus disorder prediction 176 204 - -
Pral5895g00004 390 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Pral5895g00004 390 MobiDBLite consensus disorder prediction 308 333 - -
Pral5895g00004 390 SMART QLQ_2 78 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral5895g00004 390 MobiDBLite consensus disorder prediction 361 390 - -
Pral5895g00004 390 Pfam QLQ 80 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5895g00004 Pral-Chr5895 34684 36979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5895g00004 1 377 GRF Transcription Factor Family AT3G52910 49.231 1.60e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral5895g00004 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5895g00004 - - qlo:115953466 466.848