Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5894g00011 ATGCAAAGGAGGGGTAAGGCGAATGTTTCATCGGGAAATTATGAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGAGTGGGAAGAAACAAATAGAAAGTGAACTTAACAGTATATTACACGAATGCGAGGGGACAAGTTCAGTAGTTCAGAATGAGAGGAATGGCTTGGATACAGTAGATGAGATGCCTCAAATAAAGCTACAGTTAGTCTCCACGCCTGATAAAGGACGGGGTATGATTTCACCATGTGACTTATCTCCAGCTTCGTTAGTTCATCGTGAAGAACCTTATGCCATGATAATATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTGCCTACTGATGCCGTTCCTTGTAGATCTTGTTCAATACCACTATATTGCTCCCAGCAATGCCAGATACAAGCTGGTGGACAGGTGTTCAAGAGTAATCCTGAAGACCATGGCATTCTTAAAGGTCTACCCAGTGATCTTGGGACATATGCTGCTAGAATTATATTAGAAAATGATTCTAAACATGAGATTGAGGATATTCCTGAGCATAAACATGAATGCCAAGGCGTACATTGGTCTACAGTTTTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAAGAGTGATTACGAAGATATTGCATACTTTGTGAAGAGCCTGGAACTTTTTCATTGCTATGTACAACTTCCATCTGATAGCAAATTGGATTCACATATATATGCCATTGTATTGCTATACTGTCTGCTACACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCGCAGGTTGTCTTAATTTTTTCTCAAATCAAAGTGAATTGCATGACTGTTGTTCGTATAAGATCTATAGATGCTCATGGGCTACAAGATCAGTTCCGAGAATCTCTAGCCAGTGAATGCTTAACGAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTACAAAGGTGGCAGCTTGTTCAACCATTCTTGCCAACCAAATGTTCATGCTTATTTCCTTTCACGTGCTTTGTGTATACGAACAACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCGCAGGTTGGGTTATGGGATAGTAAAGATCGCCAAGCCTTTCTGAAAGATGAGTACTCATTTCAATGTCGTTGCAGGGCTTGCTCAGAATTCAATCTGTCTGACATTGTCTTTGGTGCTTTTCACTGTGTCAGTCCAAGTTGTTCTGGTGCGGTCTTGGACAGCAGAGTAGTTAACTGGGAAAGGCAGAAAATTAAGTCCTTCCCTGGTGCTGTCAAAGTTGACAAGAATGATGACATTTATAAAATCTGTCTCCGTTTATTCAACCAAAATGATGGCTACGCTCATATTCAGCCTGGGTACTGTTTGAGATGTGGTTCTTACCGTGATTTTGAGTCTTTGTACACTGCAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCAGTAAGTTCAAAGGAAATTTCGAATCCTACTATCTCAGATGCATTAAAATCTCTTCATCTTCTGAAGTCATATTTGCATTCCTACAACAAACATATTGCAGAGGCAGAGGACAGCCTTGCTCAGGCCTTTTGTATGGTGGGAGAATTAGAATTAGCTATGGACCATTGTAAAGCATCTTTGCTGATTCTGCAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTCGAGCTTGTGAAGCTTTGTTCCATTCAAATTTCCATGGGTGATAAAACCGCGCTGGAAAGCATAAATCGAATATGTGGTATCTTCTCACGTTATTATGGACTTCATGCACAGTCGTTATTCCCATATCTTCAGTACCTTAGAAAGAGACTGGGAATTTGTGAGTGA 1911 0.4071 MQRRGKANVSSGNYEDAICDLNVAKSMESSLSGKKQIESELNSILHECEGTSSVVQNERNGLDTVDEMPQIKLQLVSTPDKGRGMISPCDLSPASLVHREEPYAMIILKQCRETHCHYCLNDLPTDAVPCRSCSIPLYCSQQCQIQAGGQVFKSNPEDHGILKGLPSDLGTYAARIILENDSKHEIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQKSDYEDIAYFVKSLELFHCYVQLPSDSKLDSHIYAIVLLYCLLHSCGARFSMDGVTMSQVVLIFSQIKVNCMTVVRIRSIDAHGLQDQFRESLASECLTSNVEQVRVGKAIYKGGSLFNHSCQPNVHAYFLSRALCIRTTEVVAAGCQLELSYGPQVGLWDSKDRQAFLKDEYSFQCRCRACSEFNLSDIVFGAFHCVSPSCSGAVLDSRVVNWERQKIKSFPGAVKVDKNDDIYKICLRLFNQNDGYAHIQPGYCLRCGSYRDFESLYTAVDKAWICIKRLQDAVSSKEISNPTISDALKSLHLLKSYLHSYNKHIAEAEDSLAQAFCMVGELELAMDHCKASLLILQKLYDPDDIVIAFELVKLCSIQISMGDKTALESINRICGIFSRYYGLHAQSLFPYLQYLRKRLGICE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5894g00011 636 SUPERFAMILY SET domain 68 405 IPR046341 -
Pral5894g00011 636 Gene3D SET domain 84 114 IPR046341 -
Pral5894g00011 636 Gene3D - 115 147 - -
Pral5894g00011 636 Gene3D SET domain 309 374 IPR046341 -
Pral5894g00011 636 Pfam SET domain 320 375 IPR001214 GO:0005515
Pral5894g00011 636 ProSiteProfiles SET domain profile. 71 375 IPR001214 GO:0005515
Pral5894g00011 636 Gene3D Tetratricopeptide repeat domain 380 628 IPR011990 GO:0005515
Pral5894g00011 636 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5894g00011 Pral-Chr5894 44139 50269 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5894g00011 SET 9.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5894g00011 K24634 - pcin:129294093 1127.08