Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00043 ATGAGTACTCTTTGCGCCGAACATGCCTCTGCAAACAAGGAGAGTATCATCAGAGAGCTCCTTGAGGGCAAGGAGTGCGCTTCCCAGCTCAAGCTTTTGTTTCAAAAGCCTTTTGGGCCTGACGGCACTCCTCCTGCCGAACAACTTGTCTCCAGAATTTTGAGATCCTTCACCCAAAGTATTTCTGATCTGACTTCCTCCGTAGCCGGAGGCGAGGTTGGTCAGATTTCGCCGATTTCCGGTCAGAGCGGGTCGCCCCTCGGAACTTCTTCCTGCAATGGGCGGAGGCCGGACGAATCCGGCCAGAGCAGGAAGATATCATCGCCGCCTGCAAAGGATCGGAGAGGTTGCTACAAGAGAAGGTATAAGACAGCAGATACTTGGACCAAAATCTCCCACACTATTGAGGATGAGCATGCGTGGAGAAAGTATGGACAGAAGGAAATCCTTAATTCTAGATTCCCAAGGAGTTACTTTAGGTGCACTCGGAAGCACGATCAAGGTTGTAAGGCAATCAAACAGGTTCAGCGAATACAGGAGAATCCAGAAAAGTTCCTAACAACGTACATTGGATCTCACACGTGCAAAGACATCCTCAGGGCTCCCCAAATGGTCACAGATTATGGTAATTTGGAATCATTTCTGGTGCCGCCCGAATCTAGTAAGGCTCCAATAATAAACGATGATCAAAAGGTGCACGGTCGTCCTTTGATCAGCTCATCATCATCGACCCCAGCCATAAAGCAGGAATATCCCAAGGAGGACACGCCACTGAGTGAAATAACGGATAATTTGGAGCCTAATTTTTGGTCAGATTTGAAGGACTTTGAGCTTCCGGAGCCGTTGAAGATGTCGACTGAACATAATGCAGATACTGTGTATTCATGTAGTGGGGGCACTATGGATTTTGGAGTGGATCAACCTGTTGGATTTGGCACTCATCCTCATCTCCACTTTGATTGA 963 0.4808 MSTLCAEHASANKESIIRELLEGKECASQLKLLFQKPFGPDGTPPAEQLVSRILRSFTQSISDLTSSVAGGEVGQISPISGQSGSPLGTSSCNGRRPDESGQSRKISSPPAKDRRGCYKRRYKTADTWTKISHTIEDEHAWRKYGQKEILNSRFPRSYFRCTRKHDQGCKAIKQVQRIQENPEKFLTTYIGSHTCKDILRAPQMVTDYGNLESFLVPPESSKAPIINDDQKVHGRPLISSSSSTPAIKQEYPKEDTPLSEITDNLEPNFWSDLKDFELPEPLKMSTEHNADTVYSCSGGTMDFGVDQPVGFGTHPHLHFD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00043 320 MobiDBLite consensus disorder prediction 98 116 - -
Pral5892g00043 320 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00043 320 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00043 320 Gene3D WRKY domain 122 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00043 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 227 IPR044810 GO:0003700
Pral5892g00043 320 MobiDBLite consensus disorder prediction 72 116 - -
Pral5892g00043 320 MobiDBLite consensus disorder prediction 72 97 - -
Pral5892g00043 320 MobiDBLite consensus disorder prediction 235 249 - -
Pral5892g00043 320 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00043 320 ProSiteProfiles WRKY domain profile. 135 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00043 320 MobiDBLite consensus disorder prediction 235 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00043 Pral-Chr5892 157777 160050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00043 11 244 WRKY Transcription Factor Family AT3G56400 39.149 1.91e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5892g00043 WRKY 8.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00043 - - gmx:100170683 273.478