Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00042 ATGAGTACTCTTTGCGCCGAACATGCCTCTGCAAACAAGGAGAGTATCATCAGAGAGCTCCTTGAGGGCAAGGAGTGCGCTTCCCAGCTCAAGCTTTTGTTTCAAAAGCCTTTTGGGCCTGACGGCACTCCTCCTGCCGAACAACTTGTCTCCAGAATTTTGAGATCCTTCACCCAAAGTATTTCTGATCTGACTTCCTCCGTAGCCGGAGGCGAGGTTGGTCAGATTTCGCCGATTTCCGGTCAGAGCGGGTCGCCCCTCGGAACTTCTTCCTGCAATGGGCGGAGGCCGGACGAATCCGGCCAGAGCAGGAAGATATCATCGCCGCCTGCAAAGGATCGGAGAGGTTGCTACAAGAGAAGGAAGACAGCAGATACTTGGACCAAAATCTCCCACACTATTGAGGATGAGCATGCGTGGAGAAAGTATGGACAGAAGGAAATCCTTAATTCTAGATTCCCAAGGAGTTACTTTAGGTGCACTCGGAAGCACGATCAAGGTTGTAAGGCAATCAAACAGGTTCAGCGAATACAGGAGAATCCAGAAAAGTTCCTAACAACGTACATTGGATCTCACACGTGCAAAGACATCCTCAGGGCTCCCCAAATGGTCACAGATTATGGTAATTTGGAATCATTTCTGGTGCCGCCCGAATCTAGTAAGGCTCCAATAATAAACGATGATCAAAAGGTGCACGGTCGTCCTTTGATCAGCTCATCATCATCGACCCCAGCCATAAAGCAGGAATATCCCAAGGAGGACACGCCACTGAGTGAAATAACGGATAATTTGGAGCCTAATTTTTGGTCAGATTTGAAGGACTTTGAGCTTCCGGAGCCGTTGAAGATGTCGACTGAACATAATGCAGATACTGTGTATTCATGTAGTGGGGGCACTATGGATTTTGGAGTGGATCAACCTGTTGGATTTGGCACTCATCCTCATCTCCACTTTGATTGA 960 0.4823 MSTLCAEHASANKESIIRELLEGKECASQLKLLFQKPFGPDGTPPAEQLVSRILRSFTQSISDLTSSVAGGEVGQISPISGQSGSPLGTSSCNGRRPDESGQSRKISSPPAKDRRGCYKRRKTADTWTKISHTIEDEHAWRKYGQKEILNSRFPRSYFRCTRKHDQGCKAIKQVQRIQENPEKFLTTYIGSHTCKDILRAPQMVTDYGNLESFLVPPESSKAPIINDDQKVHGRPLISSSSSTPAIKQEYPKEDTPLSEITDNLEPNFWSDLKDFELPEPLKMSTEHNADTVYSCSGGTMDFGVDQPVGFGTHPHLHFD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00042 319 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00042 319 MobiDBLite consensus disorder prediction 68 97 - -
Pral5892g00042 319 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00042 319 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 226 IPR044810 GO:0003700
Pral5892g00042 319 MobiDBLite consensus disorder prediction 234 248 - -
Pral5892g00042 319 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00042 319 ProSiteProfiles WRKY domain profile. 134 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00042 319 Gene3D WRKY domain 121 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00042 319 MobiDBLite consensus disorder prediction 234 259 - -
Pral5892g00042 319 MobiDBLite consensus disorder prediction 98 119 - -
Pral5892g00042 319 MobiDBLite consensus disorder prediction 68 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00042 Pral-Chr5892 157777 160050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00042 11 243 WRKY Transcription Factor Family AT3G56400 39.316 3.45e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5892g00042 WRKY 8.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00042 - - gmx:100170683 278.1