Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00041 ATGGCAAACCCCAGAAAGCAGAAAGACTCAGAAACCATGGAAGAGGCCACTGGTTGTTTGATATACCGTGCTTGTGAATTAGCTAGAAACCTGGAATCAAATTTTTCCAGCTTGGCTAGCCAACCTAAAGTACTATTCACGTCCATTGATGAGATAGTGAAGACGTTTTCGGCGGCAAAAGAAAGCCTACGACTGTGTTCCCAACACCCAACGCCATCTTCTTCTTCCTTTGGTCAAGCACGCCAGCCTGATCGGATGCCTGCAACTTCTAATTTCATGCCGGAGTGCCCAATCAGATCTACCAGCTATGCACAACCAATGGATCAGTCCATTCACGATCAAGTGCAGCGACAACCACGAACAGCTCGAATGCGACTGCCAAAGAGGAAAAGTGACTCGGCGACGAAGACAGTGATGGCACCTGCGCCTAGGTTTGGGGACACACAGATTCCACCAGAGGATGGTTTCACTTGGCGAAAATATGGCCAGAAAGTGATATTTGGCTCTAAGAACCCAAGGAGTTATTACAGGTGCACCCACCAGAAATTATATAAATGTCCTGCGAAGAAGCAAGTGCAGCGACAGGATGACAACCCTACCACATTCTCAGTAACATACCGAGGCAGTCACACCTGCGTTATGTCCTCCACAGCTCCATCTTCATCAGTTCCAGCTCCATACCTTTTTGCTGATATCTCACCCCACTTCAACACTACTACTGCCCTTTCCCCTCACTTGTCTTCATCTTCAACTTCAGTTTCCCAGTGGTTCCCACCGCCCCTCCTCGGCCTCTGCCCCGGTGCCGCCTGCGGAGGCCCCTCCACTTCAAGATATGGTAATAGTACTGATTATATGGGGGCAGATATAGCTGATGCATGTTTAATAATTCTACTGAAAAGTTGA 903 0.4839 MANPRKQKDSETMEEATGCLIYRACELARNLESNFSSLASQPKVLFTSIDEIVKTFSAAKESLRLCSQHPTPSSSSFGQARQPDRMPATSNFMPECPIRSTSYAQPMDQSIHDQVQRQPRTARMRLPKRKSDSATKTVMAPAPRFGDTQIPPEDGFTWRKYGQKVIFGSKNPRSYYRCTHQKLYKCPAKKQVQRQDDNPTTFSVTYRGSHTCVMSSTAPSSSVPAPYLFADISPHFNTTTALSPHLSSSSTSVSQWFPPPLLGLCPGAACGGPSTSRYGNSTDYMGADIADACLIILLKS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00041 300 Pfam WRKY DNA -binding domain 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00041 300 Gene3D WRKY domain 144 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00041 300 MobiDBLite consensus disorder prediction 67 93 - -
Pral5892g00041 300 ProSiteProfiles WRKY domain profile. 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00041 300 SMART WRKY_cls 152 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5892g00041 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 222 IPR044810 GO:0003700
Pral5892g00041 300 MobiDBLite consensus disorder prediction 67 86 - -
Pral5892g00041 300 SUPERFAMILY WRKY DNA-binding domain 149 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5892g00041 300 MobiDBLite consensus disorder prediction 106 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00041 Pral-Chr5892 153467 155793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00041 7 226 WRKY Transcription Factor Family AT2G40740 39.431 2.06e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5892g00041 WRKY 2.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00041 - - pcin:129294160 281.567