Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00027 ATGACAGATCTGATGGAAATGGTAGTATATACTGTGTCAGAAAAATTTTCGTCGGTGTGGAAGTATTCATATTCATCCGCTGCTTTTTCTACTGATCGAATGATCACTCACGTTAAAATTTTCTTTGCCCTTGTATCTACATCACAGGCAATAGACTTCGATCCAAACTCCTTGAGAAATGAGCTGCCAAAAGCAGTTTCATCACTGGAATGGGCTGTTTCCGAGGGAAAGGGAAGAGTGTACGTGCATTGCACGGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACTTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATATAAGAGCCATACGCGGGGCCACCTATGACTTGGCGAAGAATGATCCGTGGAAAGAACCGTTTGAGAGTCTTCCAGAATATGCATTTGAGGATGTAGCTGACTGGGAGAGGGATTTGATTCAAAATCGAGTCCGCTCTCTTCGTGGAACTTGA 522 0.4425 MTDLMEMVVYTVSEKFSSVWKYSYSSAAFSTDRMITHVKIFFALVSTSQAIDFDPNSLRNELPKAVSSLEWAVSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNIRAIRGATYDLAKNDPWKEPFESLPEYAFEDVADWERDLIQNRVRSLRGT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00027 173 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 49 141 - -
Pral5892g00027 173 Pfam Dual specificity phosphatase, catalytic domain 53 124 IPR000340 GO:0008138|GO:0016311
Pral5892g00027 173 Gene3D Protein tyrosine phosphatase superfamily 8 173 IPR029021 -
Pral5892g00027 173 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 125 IPR029021 -
Pral5892g00027 173 SMART dsp_5 11 133 IPR020422 GO:0006470|GO:0008138
Pral5892g00027 173 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 60 119 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00027 Pral-Chr5892 96715 97919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00027 50 173 Protein tyrosine phosphatase (PTP) family AT3G10940 83.871 2.67e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00027 - - gmx:100805592 240.736