Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00026 ATGATTTTAATTTCCACGGCTAGTTTTCCCTGTTCGTCTCCAGGAATGACAGATCTGATGGAAATGGTAGTATATACTGTGTCAGAAAAATTTTCGTCGGTGTGGAAGTATTCATATTCATCCGCTGCTTTTTCTACTGATCGAATGATCACTCACGTTAAAATTTTCTTTGCCCTTGTATCTACATCACAGGCAATAGACTTCGATCCAAACTCCTTGAGAAATGAGCTGCCAAAAGCAGTTTCATCACTGGAATGGGCTGTTTCCGAGGGAAAGGGAAGAGTGTACGTGCATTGCACGGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACTTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATATAAGAGCCATACGCGGGGCCACCTATGACTTGGCGAAGAATGATCCGTGGAAAGAACCGTTTGAGAGTCTTCCAGAATATGCATTTGAGGATGTAGCTGACTGGGAGAGGGATTTGATTCAAAATCGAGTCCGCTCTCTTCGTGGAACTTGA 567 0.4409 MILISTASFPCSSPGMTDLMEMVVYTVSEKFSSVWKYSYSSAAFSTDRMITHVKIFFALVSTSQAIDFDPNSLRNELPKAVSSLEWAVSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNIRAIRGATYDLAKNDPWKEPFESLPEYAFEDVADWERDLIQNRVRSLRGT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00026 188 Gene3D Protein tyrosine phosphatase superfamily 13 188 IPR029021 -
Pral5892g00026 188 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 75 134 IPR000387 GO:0016311|GO:0016791
Pral5892g00026 188 SMART dsp_5 26 148 IPR020422 GO:0006470|GO:0008138
Pral5892g00026 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 65 140 IPR029021 -
Pral5892g00026 188 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 64 156 - -
Pral5892g00026 188 Pfam Dual specificity phosphatase, catalytic domain 68 139 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00026 Pral-Chr5892 96674 97919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00026 65 188 Protein tyrosine phosphatase (PTP) family AT3G10940 83.871 6.19e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00026 - - gmx:100805592 240.736