Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00025 ATGAGTATCACCACGACCTGGGCAATAGACTTCGATCCAAACTCCTTGAGAAATGAGCTGCCAAAAGCAGTTTCATCACTGGAATGGGCTGTTTCCGAGGGAAAGGGAAGAGTGTACGTGCATTGCACGGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACTTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATATAAGAGCCATACGCGGGGCCACCTATGACTTGGCGAAGAATGATCCGTGGAAAGAACCGTTTGAGAGTCTTCCAGAATATGCATTTGAGGATGTAGCTGACTGGGAGAGGGATTTGATTCAAAATCGAGTCCGCTCTCTTCGTGGAACTTGA 396 0.4747 MSITTTWAIDFDPNSLRNELPKAVSSLEWAVSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNIRAIRGATYDLAKNDPWKEPFESLPEYAFEDVADWERDLIQNRVRSLRGT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00025 131 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 83 IPR029021 -
Pral5892g00025 131 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 18 77 IPR000387 GO:0016311|GO:0016791
Pral5892g00025 131 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 10 99 - -
Pral5892g00025 131 Pfam Dual specificity phosphatase, catalytic domain 13 82 IPR000340 GO:0008138|GO:0016311
Pral5892g00025 131 Gene3D Protein tyrosine phosphatase superfamily 5 131 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00025 Pral-Chr5892 95897 97919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00025 8 131 Protein tyrosine phosphatase (PTP) family AT3G10940 83.871 1.32e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00025 - - gmx:100805592 241.121