Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00020 ATGGCTTGTTGCTACTACCTGTCGCTGCTGGCACTGGCTCTGGTCACCCAAGCGGGCGCCGCAGAGCTGAGTGAGGAGTTCTACTCGTGCAGCTGCCCCAAATTGGCGCCCATAGTGAAGAAGGGCGTCGCCAAAGCCATCCAGAATGAAGCTCGCATGGGAGCCTCCCTGCTTCGCCTGCATTTCCACGACTGCTTTGTCAACGGGTGTGATGCATCCATACTGCTGGACGACACTGGCAACATGATAGGGGAGAAGACGGCGGCTGCAAACAACAATTCAGCGAGAGGATTCAACGTCATTGATGCCATCAAGGCCGAGGTGGAGAAGGCATGTCCCCGAGTGGTCTCCTGTGCTGACATCCTTGCCCTCGCTGCTCGTGACTCCGTCGTTCATTTGGGGGGGCCTTCCTGGGAGGTGCCCTTGGGACGAAGAGACTCAACCACCGCCAGCAGACTCGCCGCCAACAACTCCATTCCCGCCCCCTTCCTCAGTCTGACCGCTCTTAAATCCAACTTCGCCGGGCACGGCCTCTCTGTGAAGGACTTGGTGGTTCTATCAGGTGCGCACACTATTGGGCTGGCCCGATGCGTGCAATTCCGAGCGCACATCTACAACGACTCCAACATTGAAGCCTCCTTTGCCAGGTCGCTGCAGAGCAAGTGCCCCAGGAGGGGGAATGATAATGTGCTGGCACCCCTCGACTTCCAGACTCCCACCCATTTTGACAATCTCTATTTCAAGCACCTGCTCATGAAGAAGGCTCTTCTCCACTCCGACCAGGAGCTCTTCAACGGCAGTTCTTCCACCGACAATTTGGTCCACAAATACGCTTCCGACAGTGATGCCTTCTTCAAGGACTTCGCGAAGTCCATGATCAGAATGAGCAAAATCAAGCCCCTCACCGGAACCAAGGGCCAGATCAGAGTCAATTGCAGAAAAGCCAATTAA 951 0.5584 MACCYYLSLLALALVTQAGAAELSEEFYSCSCPKLAPIVKKGVAKAIQNEARMGASLLRLHFHDCFVNGCDASILLDDTGNMIGEKTAAANNNSARGFNVIDAIKAEVEKACPRVVSCADILALAARDSVVHLGGPSWEVPLGRRDSTTASRLAANNSIPAPFLSLTALKSNFAGHGLSVKDLVVLSGAHTIGLARCVQFRAHIYNDSNIEASFARSLQSKCPRRGNDNVLAPLDFQTPTHFDNLYFKHLLMKKALLHSDQELFNGSSSTDNLVHKYASDSDAFFKDFAKSMIRMSKIKPLTGTKGQIRVNCRKAN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00020 316 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Pral5892g00020 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 Gene3D Peroxidase, domain 2 160 295 - -
Pral5892g00020 316 ProSiteProfiles Plant heme peroxidase family profile. 22 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 FunFam Peroxidase 160 295 - -
Pral5892g00020 316 FunFam Peroxidase 26 167 - -
Pral5892g00020 316 PANTHER PEROXIDASE 72-RELATED 20 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 Gene3D - 27 316 - -
Pral5892g00020 316 CDD secretory_peroxidase 22 314 IPR033905 GO:0004601|GO:0042744
Pral5892g00020 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Pral5892g00020 316 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5892g00020 316 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00020 Pral-Chr5892 66637 68107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00020 21 316 Peroxidase AT5G05340 59.732 1.15e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00020 K00430 - gmx:100793973 473.396